Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1930 ATGAAAACAAACTCAAGCTTAGATGCGAAATTGTCAGATATATGCATTGGAACTTCAGCTGCACCAACATATCTTCCACCCTATTATTTTAAGAACAAAGCAGATAATGGCATAGACAAAGAGTTTAATCTCATTGATGGTGGCATATTTGCTAACAATCCggtaagctatatatatatatatataTACAAACCAAATGACTACACAAAAATCTTCTTGGTGAGTTTGGGAACAGGATTCCAAAAACCCAATGAAGAGTACGATGCAAGAAAAGCAGCACATTGGGGTGCTCTCAACTGGATTTCTCCATCAATGGAGTTTGCACTTGATGGTTCTCAGGACCTCGTGGATTACCATCTTGCCTCAGTCTTCCATTCCCAACTTGGCCACAATTATCACCGTAACTACCTCCGGATTCAGACCGATCAACTCGCCGGAAGAATGGCCCAGATGGATTGTGCCTTGGAGGATAATctgaaaaatcttgaaaatttgGCTCAAAGTATGTTGAAACATAATGTTACTAGGCTCAATTTGGACACCTTCAAGCTTCAATCAATTCTGGGTGGTCCAACCAATGCTGAGGCTCTCACAAGGTAA 600 0.3883 MKTNSSLDAKLSDICIGTSAAPTYLPPYYFKNKADNGIDKEFNLIDGGIFANNPVSYIYIYIYKPNDYTKIFLVSLGTGFQKPNEEYDARKAAHWGALNWISPSMEFALDGSQDLVDYHLASVFHSQLGHNYHRNYLRIQTDQLAGRMAQMDCALEDNLKNLENLAQSMLKHNVTRLNLDTFKLQSILGGPTNAEALTR 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1930 199 PANTHER XYLOSE ISOMERASE 2 198 - -
Sto1g1930 199 Gene3D Cytosolic phospholipase A2 catalytic domain 1 199 - -
Sto1g1930 199 PANTHER PATATIN 2 198 - -
Sto1g1930 199 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 1 59 IPR002641 GO:0006629
Sto1g1930 199 SUPERFAMILY FabD/lysophospholipase-like 7 182 IPR016035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g1930 Sto-Chr1 27660829 27661926 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g1930 4 199 Acyl Lipid Metabolism Gene Families AT4G37070 37.383 2.82e-47 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1930 - - oeu:111386732 177.178