Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1929 ATGGAAGGAGAAAAGCTTCCACCTCCTTCATATGGAAATGTTATCACTATTCTGAGTATAGATGGAGGTGGCGTTAGAGGCATCATTCCAGCCATTCTTCTTATGCATCTCGAGGCTGAGCTTCAGAAATGTAAGAAGGATGAAAATGTAAGGATCGCAGACTTTTTCGATGTCATCGCTGGAACTAGTACTGGAGGGCTCATTACTGCGATGTTAACAGCTCCAAATGAGAATGGTCGTCCTTTATTTTCTGCATCAGAAATTAGGGATTTCTATATAAAGGAATGCCCCAACATCTTCCATGAGACAtggtaa 315 0.4095 MEGEKLPPPSYGNVITILSIDGGGVRGIIPAILLMHLEAELQKCKKDENVRIADFFDVIAGTSTGGLITAMLTAPNENGRPLFSASEIRDFYIKECPNIFHETW 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1929 104 PANTHER PATATIN 7 102 - -
Sto1g1929 104 Pfam Patatin-like phospholipase 18 75 IPR002641 GO:0006629
Sto1g1929 104 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 18 104 IPR002641 GO:0006629
Sto1g1929 104 Gene3D Cytosolic phospholipase A2 catalytic domain 8 104 - -
Sto1g1929 104 SUPERFAMILY FabD/lysophospholipase-like 14 101 IPR016035 -
Sto1g1929 104 PANTHER XYLOSE ISOMERASE 7 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g1929 Sto-Chr1 27658354 27659228 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g1929 6 100 Miscellaneous Gene Families AT2G26560 70.526 7.56e-45 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1929 - - ath:AT2G26560 144.821