Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1926 ATGAGTAGTCATGAGAGTGAGAACACAAGTCTTCCCATTCCAATTCCACTTCCATCACCCACATTTGGCAAAAATGTGACCATTCTCAGTATTGACGGAGGTGGCATTAGAGGCCTCATCCCCGCCGTCATTCTTCGCCGCCTCGAGGCTGAGCTCCAGTTTTTATCAAAGGATGAAAATGTAAGGATTGCCGATTTCTTTGATGTAATAGCTGGAGTAAGCACTGGTGGGCTCATATCTGCAATGCTGGCTACTCCTGACTCTAACCAACGTCCATTGTTCACTGCTGAACAAGTGGTTCAGTTCTATAAAGACGAAGCTGCTAACATCTTCAATGAAGACGAAGCTGCCATTATTCAGACTGAGTCTCGCACTCAACAAGAGGTGGAGAATGAGGTGATGAATACTAATGGACCCAAGTATAAGGGCCTTTACTTGCGTCACATTATTCAAAACAATCTCAATGACACAAAACTAGAAGATGCTTTGACCGAACTTGTTATCCCAACTTTTGACATCAAGAAAATTGTGCCCACTATTTTCTCTACTTACAAGTTGAATGAAGCTCCACAATTGAATGCGAAGCTGTCAGATATATGCATAGCAACTTCCGCAGCACCCACATTCTTCCCACCACATTTCTTCCAAACTCATGACAACCTTCAGGAGTTTCATTTGACTGATGGCGGTTTAGCCGCACTCAATCCgGCATTGGCTGCGTTGAGTGAAGTGTCGCAATCGAAGAAGGAGAATCCGGAGATGTTCCCCATGATGGAGAATCCCAATGATTACAAGAACATCGTATTGATATCATTGGGATGTGGAATCTTTGATTCCAAGAAAGAGTACGATGCTCAAGAAGCAGCTAAGTGGGGTCGTGGAGCATGGGTTCTCAAAATCATACAACTCATTCCTCCTCTCTATGAGACACCCTTGCTGGATTTCTTGCATGAAGCTAATTGTAACATGACCGAGTACCACCTTGCTACTCTTTTCAATGGGCTCGATGCTAAAGACCATTATCTCCGAGTTCAAGACAATACATTAACACCAGAGATGTATCTCATGGATAATGCTGATCCTGAAAATTTGAGGAATCTTGAGCAATTCGCTGAGGAACTTCTAATCAAACCCGTTAAAAGGATCAATGTCCACACTTTTGAGCTGCAGGATCAACCTCAAGAGGAGGCGGACCCAAAGGAATTAAAGCAGCAAAGGATGTTGTACCCTCTTGCTCCTGGCATACATAAGGGACATAGGAGGATGGAAAAGCACCATAGgcttgcaggtgtttcggccacctgGTGA 1308 0.4297 MSSHESENTSLPIPIPLPSPTFGKNVTILSIDGGGIRGLIPAVILRRLEAELQFLSKDENVRIADFFDVIAGVSTGGLISAMLATPDSNQRPLFTAEQVVQFYKDEAANIFNEDEAAIIQTESRTQQEVENEVMNTNGPKYKGLYLRHIIQNNLNDTKLEDALTELVIPTFDIKKIVPTIFSTYKLNEAPQLNAKLSDICIATSAAPTFFPPHFFQTHDNLQEFHLTDGGLAALNPALAALSEVSQSKKENPEMFPMMENPNDYKNIVLISLGCGIFDSKKEYDAQEAAKWGRGAWVLKIIQLIPPLYETPLLDFLHEANCNMTEYHLATLFNGLDAKDHYLRVQDNTLTPEMYLMDNADPENLRNLEQFAEELLIKPVKRINVHTFELQDQPQEEADPKELKQQRMLYPLAPGIHKGHRRMEKHHRLAGVSATW 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1926 435 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 29 241 IPR002641 GO:0006629
Sto1g1926 435 SUPERFAMILY FabD/lysophospholipase-like 23 386 IPR016035 -
Sto1g1926 435 Pfam Patatin-like phospholipase 29 241 IPR002641 GO:0006629
Sto1g1926 435 Gene3D Cytosolic phospholipase A2 catalytic domain 19 410 - -
Sto1g1926 435 PANTHER XYLOSE ISOMERASE 7 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g1926 Sto-Chr1 27638651 27643133 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g1926 16 386 Miscellaneous Gene Families AT2G26560 44.800 3.40e-103 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1926 - - palz:118049561 314.309