Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1925 ATGAAAACAAACTCAAGCTTAGATGCGAAATTGTCAGATATATGCATTGGAACTTCAGCTGCACCAACATATCTTCCACCCTATTATTTTAAGAACAAAGCAGATAATGGCATAGACAAAGAGTTTAATCTCATTGATGGTGGCATATTTGCTAACAATCCgGCATTGCTTGCAATAAGTGAGGTGATCCAGCAGCACAAAATTGGGAATCCAAATTTCTCAAAGTACAAACCAAATGACTACACAAAAATCTTCTTGGTGAGTTTGGGAACAGGATTCCAAAAACCCAATGAAGAGTACGATGCAAGAAAAGCAGCACATTGGGGTGCTCTCAACTGGATTTCTCCATCAATGGAGTTTGCACTTGATGGTTCTCAGGACCTCGTGGATTACCATCTTGCCTCAGTCTTCCATTCCCAACTTGGCCACAATTATCACCGTAACTACCTCCGGATTCAGACCGATCAACTCGCCGGAAGAATGGCCCAGATGGATTGTGCCTTGGAGGATAATctgaaaaatcttgaaaatttgGCTCAAAGTCTTGAGGAACGAAGAAGaatatttcaaattataatatttatcttaCTTTTGTTTGCCTTTCgTATTGACGGAGGTGGCATTAGAGGCCTCATCCCCGCCGTCATTCTTCGCCGCCTCGAGGCTGAGCTCCAGTTTTTATCAAAGGATGAAAACGTGAGGATTGCCGATTTCTTTGATGTAATAGCTGGAGTAAGCACTGGTGGACTCATATCTGCAATGCTGGCTACTCCTGACTCTAACCAACGTCCATTGTTCACTGCTGAACAAGTGGTTCAGTTCTATAAAGACGAAGCTGCCAACATCTTCAATGAAGACGAAGCTGCCATTATTCAGACTGAGTCTCCTACTCAAGAGGAGGTGGAGAATGAGGTGATGAATACTAATGGACCCAAGTACAAGGGCCTCTACTTGCGTCACATCATTCAAAACAATCTCAATGACACAAAACTAGAAGATGCTTTGACCGAACTTGTTATCCCAACTTTTGACATCAAGAAAATTGTCCCTACTATTTTCTCTACTtacaagTTGAATGAAGCTCCACAATTGAATGCGAAGCTGTCAGATATATGCATAGCAACTTCCGCAGCACCCACATTCTTCCCACCACATTTCTTCCAAACTCATGACAACCTTCAGGAGTTTCATTTGACTGATGGCGGTTTAGCCGCACTCAATCCgGCATTGGCTGCGTTGAGTGAAGTGTCGCAATCGAAGAAGGAGAATCCGGAGATGTTCCCCATGATGGAGAATCCCAATGATTACAAGAACATCGTATTGATATCATTGGGATGTGGAATCTTTGATTCCAAGAAAGAGTACGATGCTCAAGAAGCAGCTAAGTGGGGTCGTGGAGCATGGGTTCTCAAAATCATACAACTCATTCCTCCTCTCTATGAGACACCCTTGCTGGATTTCTTGCATGAAGCTAATTGTAACATGACCGAGTACCACCTTGCTACTCTTTTCAATGGGCTCGATGCTAAAGACCATTATCTCCGAGTTCAAGACAATACATTAACACCAGAGATGTATCTCATGGATAATGCTGATCCTGAAAATTTGAGGAATCTTGAGCAATTCGCTGAGGAACTTCTAATCAAACCTGTTAAAAGGATCAATGTCCACACTTTTGAGCTGCAGGATCAACCTCAAGAGGAGGCGAAGCCAAAGGAATCTAACCACCTAAGGATGTTGTACCCTCTGACTCCTGGCATACATAAGGGGCATAGGAGGATGGAAAAGCACCATAGTTTGAGTTGTGGAAGCAGTCCATATACATAG 1827 0.4209 MKTNSSLDAKLSDICIGTSAAPTYLPPYYFKNKADNGIDKEFNLIDGGIFANNPALLAISEVIQQHKIGNPNFSKYKPNDYTKIFLVSLGTGFQKPNEEYDARKAAHWGALNWISPSMEFALDGSQDLVDYHLASVFHSQLGHNYHRNYLRIQTDQLAGRMAQMDCALEDNLKNLENLAQSLEERRRIFQIIIFILLLFAFRIDGGGIRGLIPAVILRRLEAELQFLSKDENVRIADFFDVIAGVSTGGLISAMLATPDSNQRPLFTAEQVVQFYKDEAANIFNEDEAAIIQTESPTQEEVENEVMNTNGPKYKGLYLRHIIQNNLNDTKLEDALTELVIPTFDIKKIVPTIFSTYKLNEAPQLNAKLSDICIATSAAPTFFPPHFFQTHDNLQEFHLTDGGLAALNPALAALSEVSQSKKENPEMFPMMENPNDYKNIVLISLGCGIFDSKKEYDAQEAAKWGRGAWVLKIIQLIPPLYETPLLDFLHEANCNMTEYHLATLFNGLDAKDHYLRVQDNTLTPEMYLMDNADPENLRNLEQFAEELLIKPVKRINVHTFELQDQPQEEAKPKESNHLRMLYPLTPGIHKGHRRMEKHHSLSCGSSPYT 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1925 608 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 201 413 IPR002641 GO:0006629
Sto1g1925 608 Coils Coil 172 192 - -
Sto1g1925 608 Pfam Patatin-like phospholipase 203 413 IPR002641 GO:0006629
Sto1g1925 608 SUPERFAMILY FabD/lysophospholipase-like 203 558 IPR016035 -
Sto1g1925 608 MobiDBLite consensus disorder prediction 588 608 - -
Sto1g1925 608 Gene3D Cytosolic phospholipase A2 catalytic domain 1 190 - -
Sto1g1925 608 Gene3D Cytosolic phospholipase A2 catalytic domain 199 579 - -
Sto1g1925 608 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 1 59 IPR002641 GO:0006629
Sto1g1925 608 PANTHER XYLOSE ISOMERASE 202 563 - -
Sto1g1925 608 PANTHER XYLOSE ISOMERASE 2 183 - -
Sto1g1925 608 SUPERFAMILY FabD/lysophospholipase-like 7 185 IPR016035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g1925 Sto-Chr1 27619833 27628349 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g1925 197 558 Miscellaneous Gene Families AT2G26560 43.443 4.95e-94 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1925 - - palz:118049561 298.516