Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1871 ATGCTTCACAATCAACTCTGGATTTCCTTCTCTCGCTATCGGCTTGCTAAGGCTACAAACATCATCGTCCTTGATAGAGGCCTTGAATTCCATCAAGTTGACAGAGAAATCACCTGGGACGATCAGATATTGTTGACAGGAATACTGTATTACGGTGGATACATGATATTTCCAGAAGCTTCTTATATGCCTTATTGGAGAACTGATGGTGTCATTATTACTGCACTCTTGCATATGGGTGTTGTGGAGTTTCTCTATTATTGGTTGCACAGAGCACTTCATCACCATTTTCTCTACTCTCCTGTGATTCATCCATTTGCTGAGGTGCTAGCATACTTTGTGCTATTTGCAATACCACAATTAACTGCATTATTCACAAGAACTATCTCCATAGCCTCCCTCTTTGGTTATGTGTTTTACATTGATTTTATGAACAATTTGGGACATTGCAACTTTGAGTTCATCCCAAACAaactcttctctttctttcccatCTTCAAGTATCTCTGCTATACTCCATCGTTTCATTCATTGCATCACACAAAATTCAGGACAAATTACTCTCTTTTCATGCCAATATATGACTACATTTATGGCACTATGGATGAAGCCTCAGATGAAACTTATGAAACATCCTTGAAGAGACCAAAGGAATCACCAAATGTGGTGCATTTGACCCACTTAACCACACCAGATTCACTCTATCATCTTCCAATTGGGATTGCTTCTTTGGCCTCTAATcctctttcatcatcatcatcaaaatgGTACCTTCGTTTCATGTGGCCTTTCACCTTTTGGTTTAACCTAATGGCTTGGATTTTGGGTCACTCATTTGTCTCAGAAAGGACCACTTTCAAAAACCTCACTTTGCAAACATGGGTTGTACCAAGATTTACTAAACAATATCTTTCAAAAAAGCAGACCCCAAAATTGAACAAGTTAATTGAAGAGGCAATACTAGAGGCTAATTCTTGTGGTGTTAAAGTGCTTAGTCTAGGGCTTCTAAATCAGATGAAAATAGTAGATGGAAGTAACTTAGCTGCTGCTATTGTTGTGAATAGCATTCCAAAAGGGACAAATAAGGTTCTGCTGAGAGGCAACTTCGATAAGCTTTATTTTTCTATAGCCAATGCTTTGTGCCAAAGAAATGTTCAGGTAGTTACATTATACCAAGATGAATTAAGGATGCTTGAACTGAAACTCAACACCAAGCGCAAACAAAGTTTTGCTCTTTTAGCAGCTGACTCTACTTTGAAGATATGGTTGGTAGGAGATGGATGGAATGAAGAAGAACAGAAGAAAGCACCAAAAGGATCAGTGTTCATTCCATTCTCTCAATTCCCTCCTAACAAATTGAGGAAAGATTGCTTCTATCACTATACACCAGCAATGATCGCCCCTCCTTCATTCATCAACATGTATTCTTGTGAGAATTGGCTGCCAAGAAGAGCAATGAGTGGGTGGCGTATAGCAGGAATAGTGCATGCCTTGGAAGCAAGGAATACAATAGATTGTGGTTTTACCACTTTCAGTATCAACAATATATGGCATGCCACTCTTCGTCATGGTTTCCAACCTCTCAACACTCACCACTCCCTCTGA 1605 0.3826 MLHNQLWISFSRYRLAKATNIIVLDRGLEFHQVDREITWDDQILLTGILYYGGYMIFPEASYMPYWRTDGVIITALLHMGVVEFLYYWLHRALHHHFLYSPVIHPFAEVLAYFVLFAIPQLTALFTRTISIASLFGYVFYIDFMNNLGHCNFEFIPNKLFSFFPIFKYLCYTPSFHSLHHTKFRTNYSLFMPIYDYIYGTMDEASDETYETSLKRPKESPNVVHLTHLTTPDSLYHLPIGIASLASNPLSSSSSKWYLRFMWPFTFWFNLMAWILGHSFVSERTTFKNLTLQTWVVPRFTKQYLSKKQTPKLNKLIEEAILEANSCGVKVLSLGLLNQMKIVDGSNLAAAIVVNSIPKGTNKVLLRGNFDKLYFSIANALCQRNVQVVTLYQDELRMLELKLNTKRKQSFALLAADSTLKIWLVGDGWNEEEQKKAPKGSVFIPFSQFPPNKLRKDCFYHYTPAMIAPPSFINMYSCENWLPRRAMSGWRIAGIVHALEARNTIDCGFTTFSINNIWHATLRHGFQPLNTHHSL 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1871 534 Pfam WAX2 C-terminal domain 363 527 IPR021940 -
Sto1g1871 534 Coils Coil 388 408 - -
Sto1g1871 534 PANTHER VERY-LONG-CHAIN ALDEHYDE DECARBONYLASE CER1 1 530 - -
Sto1g1871 534 Pfam Fatty acid hydroxylase 77 200 IPR006694 GO:0005506|GO:0008610|GO:0016491
Sto1g1871 534 PANTHER STEROL DESATURASE 1 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g1871 Sto-Chr1 27065178 27073416 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g1871 1 528 Lipid Metabolism Gene Families AT1G02190 50.702 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1871 K15404 - jre:108989715 685.256