Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1808 ATGGCCAGAACGGAGAGAATCgccaggaagaagaagaagaacaattCGCCTGATTGTAATAATCTCTCCTCCATCTTCGATTGCTTCAGAGAGATCCCCGATTTGACGATTCAGTCTTATCTGGAGCGAATCTTCAGGTACACTCGCGCTGCTCCCTCTGTCTATGTCGTCGCCTACGTCTACATCGATCGCTTCTGCCATAACAATCCTGGGTTTCGAATCAATGCCAGAAATGTTCATAGGCTTCTCATTACTACCATCATGGTCGCTTCTAAATATGTTGAAGAcatGAATTACAGAAACTCATACTTTGCAAGAGTTGGAGGATTGACCACAAATGAATTGAACAAGTTGGAGGTAGAATTTCTATTCATGATGGGTTTCAAGTTGCATGTGAATATACTTGTATTTTTGAAGACTTTTAAGATGTTGGCTATTGATCCTGCGAAGAAGATATCATTTAATCGACTCATTAGTAACGGTGATTTGGTTATTGTTTATGAGAGGCATGACAACATGAAGCCTATAACagtatgtgagagttcagtccTCCAGAATCGTTTTGGTGTTTTCAAGCATTCTGAATGGATAGGAAAGCCATTTGGGTCCAAGGTATTCAGCAATAAGGGTGGCTTTGTGTACTTGTTAGCTCCTACTCCAGAATTATGGACTCTAGTGTTAAGCCATAGGACACAGATTCTATATATTGCGGATATTAGCTTTGTAGTCATGTACTTGGAGGTTGTCCCTGGTTGCGTCGTTCTGGAATCTGGAACCGGAAGTGGATCTTTAACTACTTCTCTTGCGAGGGCAGTAGCTCCTACTGGACACGTTTATACATTTGATTTCCATGAACAAAGGGCAGGATCAGCTAGGGAAGATTTTGAGCGGACAGGACTAAGCAGCTTAATCAGTGTGGGCGTGAGGGACATCCAGGGTGAGGGATTTCCAGATGAATTTGCAGGTTTGGCTGACGCAGTATTTCTGGATTTACCCCAACCTTGGCTAGCTATTCCTTCAGCTGCTAAAATGTTAAAACAGGATGGAACTTTGTGCTCATTCTCCCCTTGTATTGAACAAGTACAACGATCTTGTGAAACACTTCAAACCAGCTTCACAGATGTAAGGACATTTGAGGTGCTTCTACGGACATATGAAATTCGAGAAGAAAGATTGGATGGCATTACTGGGGAAGGGAGTGGTCCTAATGGCTCTCTACCTTGCAAGAGGAGACAATGTTCTGATGGAAGCAATGTAATTAGTAGTAGTCCTGCTTCTTGTGTCATGGCTAGACCTAGTGGTGAAGCTAGAGGTCACACAGGCTATTTGACATTTGCAAGACTCAAATGCCTCTCATGA 1359 0.4128 MARTERIARKKKKNNSPDCNNLSSIFDCFREIPDLTIQSYLERIFRYTRAAPSVYVVAYVYIDRFCHNNPGFRINARNVHRLLITTIMVASKYVEDMNYRNSYFARVGGLTTNELNKLEVEFLFMMGFKLHVNILVFLKTFKMLAIDPAKKISFNRLISNGDLVIVYERHDNMKPITVCESSVLQNRFGVFKHSEWIGKPFGSKVFSNKGGFVYLLAPTPELWTLVLSHRTQILYIADISFVVMYLEVVPGCVVLESGTGSGSLTTSLARAVAPTGHVYTFDFHEQRAGSAREDFERTGLSSLISVGVRDIQGEGFPDEFAGLADAVFLDLPQPWLAIPSAAKMLKQDGTLCSFSPCIEQVQRSCETLQTSFTDVRTFEVLLRTYEIREERLDGITGEGSGPNGSLPCKRRQCSDGSNVISSSPASCVMARPSGEARGHTGYLTFARLKCLS 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1808 452 Gene3D Vaccinia Virus protein VP39 220 450 IPR029063 -
Sto1g1808 452 Gene3D - 152 219 - -
Sto1g1808 452 ProSiteProfiles tRNA (adenine(57)-N(1)/adenine(58)-N(1) or adenine(58)-N(1)) (EC 2.1.1.219 or EC 2.1.1.220) family profile. 161 449 IPR014816 GO:0016429|GO:0030488|GO:0031515
Sto1g1808 452 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 157 448 IPR029063 -
Sto1g1808 452 Gene3D - 2 146 - -
Sto1g1808 452 SUPERFAMILY Cyclin-like 37 131 IPR036915 -
Sto1g1808 452 Pfam Cyclin 24 130 IPR013922 GO:0000079|GO:0019901
Sto1g1808 452 PANTHER TRNA (ADENINE(58)-N(1))-METHYLTRANSFERASE CATALYTIC SUBUNIT TRMT61A 145 449 - -
Sto1g1808 452 Pfam tRNA methyltransferase complex GCD14 subunit 211 447 IPR014816 GO:0016429|GO:0030488|GO:0031515
Sto1g1808 452 PANTHER TRNA (ADENINE(58)-N(1))-METHYLTRANSFERASE 145 449 IPR014816 GO:0016429|GO:0030488|GO:0031515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g1808 Sto-Chr1 26265475 26281938 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1808 K07442 - gmx:100793069 504.982