Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1796 ATGTCGACGCAGCAGCTCCGACCCCTTCCACCCCACAATCCATTTCTCTGTTCTAAACTCGATGCTCGTCTCAACGTAACTTCCATCACTTCTTCTCTGAAACTATATTCAACCCCAATTATAACAAACGCAATAACCCTAGACGAGCTTCCCCCTAACGCCGTTCGCCGGAAGAGGGACCCACAATGGAGAGGAGGCTTCAGCCTCGGCGTCGATTTGGGAATGGCTCGTACAGGCGTTGCTCTCAGTAAAGGCTTCTCTATTCGTCCTTTGACGGTTCTGGAACTGCGAGGACAGAAGCTTGAGGTCCAGCTTCTCAAGATTGCTGAACAGGAGgaAGCTGATGAGTTTATAGTTGGACTTCCTAAATCGTCTGACGGGAAGGAAACACCACAGTCAAACAAGGTTCGCAGTGTTGCCGGAAGGCTTGCAGTTCGAGCTGCTGAAAGGGGTTGGAGAGTGTATCTACAGGATGAACATGGGACAACAACGGAAGCAATGGATCGGATGATTAACATGGGCCTCAGCAAGTCCTCTCAGCAAAGGAAACTTGATGCTTATGCTGCCATGaTGGTACTGGAGAGATATTTCCGCATGACAGGTCAGGGAATTGAGCTCGTATTGCCCAAGAATCTTGATCTACAAGAAAAACTTCAAAAGGGTCCTCCTGAAGACATTGATTTCTTGGATGATTTCAAGAGCTGA 705 0.4823 MSTQQLRPLPPHNPFLCSKLDARLNVTSITSSLKLYSTPIITNAITLDELPPNAVRRKRDPQWRGGFSLGVDLGMARTGVALSKGFSIRPLTVLELRGQKLEVQLLKIAEQEEADEFIVGLPKSSDGKETPQSNKVRSVAGRLAVRAAERGWRVYLQDEHGTTTEAMDRMINMGLSKSSQQRKLDAYAAMMVLERYFRMTGQGIELVLPKNLDLQEKLQKGPPEDIDFLDDFKS 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1796 234 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 39 230 IPR005227 GO:0006364
Sto1g1796 234 PANTHER POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN 39 230 - -
Sto1g1796 234 CDD YqgF 69 197 IPR005227 GO:0006364
Sto1g1796 234 SUPERFAMILY Ribonuclease H-like 67 199 IPR012337 -
Sto1g1796 234 Hamap Putative pre-16S rRNA nuclease [yqgF]. 66 201 IPR005227 GO:0006364
Sto1g1796 234 Pfam Holliday junction resolvase 68 198 IPR005227 GO:0006364
Sto1g1796 234 TIGRFAM RNAse_H_YqgF: putative transcription antitermination factor YqgF 69 197 IPR005227 GO:0006364
Sto1g1796 234 SMART rnase_8s 66 166 IPR006641 GO:0006139
Sto1g1796 234 Gene3D - 68 204 IPR037027 GO:0006139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1796 - - gmx:100810356 343.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g1796 1 26146863 26150089 Sto1g1796 1 26146863 26150089 ECH