Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1776 ATGCCGAAACGCAACTCCAAATCCAAAGATGCCAATGAGAAATCAAGCTCAGATGAGGCAGAAACTGCTACCCAAGGCGTATCCGAGTACGAGAAACAGAGGCTATCAAGGATTGCGGAAAACAGAGCAAGATTGGAGGCTCTTGGGTTGCCCAAGATGGCGTCCTCTTTTAATGCTCTGGGTCACAACAAGGTTAGGGTTAAGAAGGGGAAAgagaaggttgaagatgatgaagaatacACGCCTGATGAGGTAGAAGCGAGATCAAGTTCTTCGAGCGGAGACGATGGGCATGAAGACGAAGATGAGGATTTTGTTAGTGAAAAAACTTCCCGGTCACGGAAAAGGAAGATGAAGCTTAAACATTTAAAGCCAAAAGCCAGAGCTTCAAGGCAGGAGCGCGACAATCGTTCATATCAaatagatgatgatgaagctTTGAAGCAGGCAATTGCTCTTTCACTACAAGACTCAGCAAAAGTTTCATCTTGTTCTGACAAGCATGTAGTGAATACTACCCAAGTGGAGATGAAGGGAAACGCTCACAATCAAGAAGATAATGGAAAAAGGAAGAACAAAAAATCGTTTGCTAGTCGGTTGCAAATGACTGAGGATGAAGTCATTGTACACTTTTTCCAGATGGATGAAGCGGGTAAAGGAAGTGTATCAATAAGGGATTTACAAAGAGTTGCTACGGCTCATGATTTTACCTGGACAGATAAGGAGTTAGCTGATATGATTCGCTACTTCGATAGTGATGGAGATGGAAAGCTAAGCTTTGATGATTTCCAAAAGATTGTTGTTCGCTGCAACATGATCAAAGGGTCTGAAAATTTTTGA 840 0.406 MPKRNSKSKDANEKSSSDEAETATQGVSEYEKQRLSRIAENRARLEALGLPKMASSFNALGHNKVRVKKGKEKVEDDEEYTPDEVEARSSSSSGDDGHEDEDEDFVSEKTSRSRKRKMKLKHLKPKARASRQERDNRSYQIDDDEALKQAIALSLQDSAKVSSCSDKHVVNTTQVEMKGNAHNQEDNGKRKNKKSFASRLQMTEDEVIVHFFQMDEAGKGSVSIRDLQRVATAHDFTWTDKELADMIRYFDSDGDGKLSFDDFQKIVVRCNMIKGSENF 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1776 279 CDD EFh 214 267 IPR002048 GO:0005509
Sto1g1776 279 ProSitePatterns EF-hand calcium-binding domain. 251 263 IPR018247 -
Sto1g1776 279 Pfam EF-hand domain pair 210 267 IPR002048 GO:0005509
Sto1g1776 279 MobiDBLite consensus disorder prediction 182 196 - -
Sto1g1776 279 SMART efh_1 242 270 IPR002048 GO:0005509
Sto1g1776 279 Gene3D - 158 277 - -
Sto1g1776 279 MobiDBLite consensus disorder prediction 172 196 - -
Sto1g1776 279 ProSiteProfiles EF-hand calcium-binding domain profile. 238 273 IPR002048 GO:0005509
Sto1g1776 279 SUPERFAMILY EF-hand 194 269 IPR011992 -
Sto1g1776 279 MobiDBLite consensus disorder prediction 112 127 - -
Sto1g1776 279 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 142 161 IPR003903 -
Sto1g1776 279 MobiDBLite consensus disorder prediction 1 17 - -
Sto1g1776 279 MobiDBLite consensus disorder prediction 49 141 - -
Sto1g1776 279 MobiDBLite consensus disorder prediction 1 34 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g1776 24 276 EF-hand Containing Proteins AT1G73440 41.016 1.79e-49 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1776 - - gmx:100806103 305.449