Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1688 ATGTCATTGTCGGATTCCGAAACCGCCTCATCAGAGTACAAACCCTTCCGCCAAATCAGCCGCGACCGTTTATTATATGAAATGCTTGGATCAGCAAAGTCGGGAGATTCTaaagcatggaagGTTCTCATAATGGATAAAGTCACAGTGAAAGTTATGTCACATTCATGTAAAATGGCAGATATCACAGACCAAGAAGTTTCCTTGGTGGAAGACCTTTTCAGGAGAAGGCAACCATTACCAACTCTGGATGCTGTTTATTTCATGCAGCCAATAAAAGAGaaTATTATCATGCTCTTGTCTGACATGTCTGGAAGGGAGCCCTTATACAGGAAagcatttatattttttagctCATCAGTCCCAAAGGAATTTATAAACCACATCAAGTGTGATACAAGTATCTTACCCCGCATAGGTGCATTGAGAGAGATGAATTTGGAATATTTTCCAGTAGATAGCCAGGCATTTGTCACTGATCAAGATAGAGCAATGGAAGAACTTTATGGCAATATTGAGAATACTCGAAGAGTTAACACTTGCTTGAACGTTATGGCAACTCGAATAGCTACGGTGTTGGCTTCATTGAAGATTGCTCCTGTCATTCATGAATGGACCTATGATGCTATGTGCCACGATTTGTTGGATATGGAGGGAAATAAATATGTACAACAGGTTCCCAGCAAAACAGGGGGTGAACCTGAAAAAAAGGAGTTCATCCTAGATGAAAATGATCCAATCTGGTTTGAGCTTCGCCATTCACATATAGCAGATGCTAGTGAAAGATTGCACGACAAGATGACCACCTTTATGTCAAAGAACAAAGCTGCTCAAATTCATCAAAGTGGAAGAGATGGTGGTGAAATATCTACGCGAGATTTGCAGAAAATGGTTCAAGCATTACCCCAATACACTGAGCAAATGGAAAGGATTTCTCTCCATGTAGAGCTAGCTGGAAAGATCAACAAAATTATTAGAGACGCAGGACTTCGAGACCTTGGACAATTAGAGCAGGATCTTGTTTTCGGAGACGCAGGAGCCAAGGAAGTTATTAACTTCCTTAGAACGAAGCAGGATACAACAGTTGAATACAAGTTGCGTTTATTAATCATTTATGCAATAGTCTATCCTGAGAAATTTGAGGGAGATAAAGCTACAAAGCTAATGCAGTTGGCAAAACTGTCACCCGATGACATGAAGGTCATCAGTAATATGCAAATGCTAGCAGGATCATCAATTAGAAAGACATCAAATGCTAGCAGTTTCTCACTCAAGTTCAGTAACCAGAAGACAAAGCAAGCAGCACGAAAAGACCGTACTGATGAGGAGGAAACATGGCAGCTATTTCGATTTTTCCCCATGTTAGAGGAACTCCTTGATAATCTCCACAAGGGTCAGTTACCAAAGAGTGATTATTCCTGTAAAAACGAACCAGGTGCTCCCGTTCAAGGGGGTTCCGCTAAAGGAGGGCAACGCACACAACCCGCTGCAGCTAATACTCCGCATTCAATGAGATCAAGACGGACAGCCAATTGGGGACGATCTCGTCACTCAGATGATGGATATTCAAGTGACTCCATGTTGAAGAATGTGTCTACTGATTTCAAGAAGATGGGGAAGCGCATCTTTGTGTTTATCATTGGTGGGGCTACTCGATCAGAGCTTCGAGTTTGCCACAAATTGACAACAAAACTGAGGAGGGAGGTCATCCTTGGTTCTTCTTCCATCGATGATCCTCCCCAATATATCACGAACTCCCCCGAAGACCTCCTCGACGTGCACAACCAGGCCCGGGCCGAGGTCGGCGTGGGCCCACTTTCGTGGAACGAGACCCTCGCGGCCTACGCTCAGAGCTACGCGGATAAGAGGATCGACGACTGCGAAATGGAGCACTCTATGGGGCCATATGGTGAGAACTTGGCTATGGCATATGAGAATATGGATGGGACGGATGCTGTCAAGTTGTGGCTCACAGAGAAAGAAAACTATGACCCTTCTTCAAACACATGCAAGAACGATGAGTGCCTACATTATACACAAATTGTGTGGCGGGACACGGTTCAAGTAGGGTGTGGTAGGTCTAAGTGCAAGAATGGATGGATGTTTGTGATATGTAGTTATGCTCCAATAGGGAACATTGAAGGCCAACGACCATATTGA 2160 0.4324 MSLSDSETASSEYKPFRQISRDRLLYEMLGSAKSGDSKAWKVLIMDKVTVKVMSHSCKMADITDQEVSLVEDLFRRRQPLPTLDAVYFMQPIKENIIMLLSDMSGREPLYRKAFIFFSSSVPKEFINHIKCDTSILPRIGALREMNLEYFPVDSQAFVTDQDRAMEELYGNIENTRRVNTCLNVMATRIATVLASLKIAPVIHEWTYDAMCHDLLDMEGNKYVQQVPSKTGGEPEKKEFILDENDPIWFELRHSHIADASERLHDKMTTFMSKNKAAQIHQSGRDGGEISTRDLQKMVQALPQYTEQMERISLHVELAGKINKIIRDAGLRDLGQLEQDLVFGDAGAKEVINFLRTKQDTTVEYKLRLLIIYAIVYPEKFEGDKATKLMQLAKLSPDDMKVISNMQMLAGSSIRKTSNASSFSLKFSNQKTKQAARKDRTDEEETWQLFRFFPMLEELLDNLHKGQLPKSDYSCKNEPGAPVQGGSAKGGQRTQPAAANTPHSMRSRRTANWGRSRHSDDGYSSDSMLKNVSTDFKKMGKRIFVFIIGGATRSELRVCHKLTTKLRREVILGSSSIDDPPQYITNSPEDLLDVHNQARAEVGVGPLSWNETLAAYAQSYADKRIDDCEMEHSMGPYGENLAMAYENMDGTDAVKLWLTEKENYDPSSNTCKNDECLHYTQIVWRDTVQVGCGRSKCKNGWMFVICSYAPIGNIEGQRPY 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1688 719 CDD CAP_PR-1 587 719 - -
Sto1g1688 719 SUPERFAMILY Sec1/munc18-like (SM) proteins 16 584 IPR036045 -
Sto1g1688 719 SUPERFAMILY PR-1-like 585 719 IPR035940 -
Sto1g1688 719 Gene3D - 453 585 IPR027482 -
Sto1g1688 719 Gene3D CAP 586 719 IPR035940 -
Sto1g1688 719 Gene3D Syntaxin Binding Protein 1; Chain A, domain 2 204 325 IPR043127 -
Sto1g1688 719 Gene3D - 9 144 IPR043154 -
Sto1g1688 719 PANTHER PROTEIN TRANSPORT SEC1A 17 197 - -
Sto1g1688 719 PANTHER PROTEIN TRANSPORT SEC1A 197 584 - -
Sto1g1688 719 PANTHER VESICLE PROTEIN SORTING-ASSOCIATED 17 197 IPR001619 GO:0016192
Sto1g1688 719 PANTHER VESICLE PROTEIN SORTING-ASSOCIATED 197 584 IPR001619 GO:0016192
Sto1g1688 719 Pfam Sec1 family 198 583 IPR001619 GO:0016192
Sto1g1688 719 Pfam Sec1 family 41 202 IPR001619 GO:0016192
Sto1g1688 719 ProSitePatterns CRISP family signature 2. 702 713 IPR018244 GO:0005576
Sto1g1688 719 SMART SCP_3 585 715 IPR014044 -
Sto1g1688 719 Gene3D - 329 451 - -
Sto1g1688 719 Pfam Cysteine-rich secretory protein family 591 707 IPR014044 -
Sto1g1688 719 MobiDBLite consensus disorder prediction 470 527 - -
Sto1g1688 719 Gene3D - 149 202 IPR027482 -
Sto1g1688 719 PRINTS Allergen V5/Tpx-1 family signature 606 624 IPR001283 -
Sto1g1688 719 PRINTS Allergen V5/Tpx-1 family signature 652 665 IPR001283 -
Sto1g1688 719 PRINTS Allergen V5/Tpx-1 family signature 675 691 IPR001283 -
Sto1g1688 719 PRINTS Allergen V5/Tpx-1 family signature 702 715 IPR001283 -
Sto1g1688 719 MobiDBLite consensus disorder prediction 487 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g1688 Sto-Chr1 24952798 24975955 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1688 K15292 - egr:104444351 795.423