Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1609 ATGAACGAAAAAAGCAAGCGAAGGGAAACAAAAACTTGCTGCATTTCCCACGAGTTCTTCCGAGTAGCTTCAGCAAACCCTAACAAAATCGCAGTAATCCATGCTTCCGGCGTGGCCCAGTTTTCCAGAGAGCTTCGTGAAAAATCTACTTCATCCAACTTCCACCGAGACATTATCGAGCTCTTAGACAAGCGCGCCGAATCAATTTCTCCGCCTGTGTACGCTGGGGACAGTTGCTACACCTACTCTGATTTGTTAAAGGCCGTTCACTCCCTTAGTTCTCGCCTCCGCTCTATCCTGCTTGGCGCTGATGATCCCTATTTGATCCGACCCAAAGCTCAAGGAAGTACTGATGTCAACAGAAAAGAAGGAAGCACTGTTCAAACACTAAACTCGTCAAAAATTTTAATGCCAAGTGGAGAAACAAAGGCTGACCCGAATAAAGAATATAGACCAAAGATAGTTGGAATATATATGCCACCTTCAGTTGAATATATTGTTGCTGTTCTTTCTGTTTTAAGGTGTGGGGAAGCTTTCTTGCCTCTAGATCCCTTTTGGCCAAAGGGAAGGATACTATCAATTATTTCTTCTTCGAAGGCTGATCTCATTATAAAGTCCCGGTCTTCATTTGGTAATAGTAACTCGGATTGGCTTGATGAATCATATTGGCTTGTGGACTCAAGCTGTTGTCCTCTCTTAAACTTCTCCATGGAAGAAAATCTTCAAGAGTGTCCAACAGATTTGGCATGGCCTTGTGAAATTGAAAAGCAGCGATCTTTCTGTTATCTGATGTACACTTCAGGGTCAACTGGAAAGCCAAAAGGAGTATGTGGCACTGAAGAAGGTCTTTCAAACCGCTTTTTCTGGATGCAAGGAATTTATCCACTGGATGGGCCAGATTTACTGTTGTTTAAGTCATCAATTAGCTTTGTGGATCACCTGCAAGAATTCCTCAGTGCTATCTTGACTGCTTCTGTTCTAGTTATTCCTCCTTTCTGTGAGCTGAAAGACAATGTATATTCTCTGATAGATTTTCTGCAGAGGGCAACTCACTCTGAAAAATTCAAGGCTTATTTTATTAATAGGCTTACAGCTGTTCCATCACTAATGAGGACTATTCTTCCTGTATTGCAAGCCCATGTTGACATGCGGGTTCGTAGTTCGTTGAAATTGCTTGTGCTAAGTGGTGAAAATTTTCCTTTAACCTTGTGGGAGATGCTTTCTACTTTGTTACCAAAGACATCAATCTTGAATTTATATGGAAGTACTGagGTCTCTGGCGATTGTACATATTTTGATTGCAAGAGGATGCCAATGATTTTGAAGACAGAGATACTAACTAGTGTGCCAATAGGTTTGCCTATTTCCAACTGTGATGTGCTGCTTCTTGGTGAAAATGATGCTTCAAATGAGGGAGAGCTATATGTTGGTGGTTCCTGCATTTCTAGAGGCTACTACACTCTGTCAAATTTAATGTCTGATCAGTTTGTGAAATTGCCTCGAAGTTATGGTTGTGGTGGTCGTGTTGATACTTGCCAAAGCCAATTATACTTTAGAACTGGTGATTTAGCCAAAAAGTTACCTAGTGGTGACTTTGTTTTTTTGGGAAGAAAAGACCGCATGATAAAAGTCAATGGACAGCGTGTTGctttggaagaaattgaaaatttactAAGGGAACACCCAGACATAAATGATGCTGCTGTAATttgtcaaaataatgaaggagAACTGTTGCATTTGGAAgcatttataatattaaaagatATGGAAAGATTGGGCGAATTATTAACACCTTCAATTAGAAGTTGGATGATTAACAACCTTCCGTCAGTCATGGTTCCTAATCGTTTCATCTTTACAGAATCATTTCCTATGACTTCCAGTGGTAAAGTTAATTATGAGTTGTTGGCAGGTTCAACTTTATTCACAAAGCATGCGCAGGATAAGGTTGGCAACTTAGGATGCAGTAATCTTCTACAACTTGTTAAGAAGGAACTGAAAATCAGAGTGGAATTTTCTGATGCATATTTCACTGATAATGCAAGGAATTTATACACAAGaaGCAGTTCTCCctacaaaaatgaagaaattgctTTATTATTGCATGAACAGGAATTTTGTGATGCTTTAATGGTTGAAGAGGTTTCCAatgatgaagatttctttcaGATGGGTGGGAACTCTCTTGCTGCTGCACACGTTGCTCATAATTTGGGCATTGATATGAGATTCCTTTATTACTTTCCAAGTCCTTTTAAGCTATGTATAGCTCTTATACAGAAAAGGGGATCATGCCCTATGCATAACAACTTGGATAGTTGTTCAAAGTTAAATGTAGATAGACAAAGTAATTCATTTTCTTCCTATCTTTCTGAAAATGCTAATCTCCTTGAACCAAGGCAAATTTCTAAATACGATGGCAGTAGTTCTTCTCCTTTAAAACGCTTGAGGAGGGATCTTACCACAGATATTACATCAGGTGGTGATAAATATATCCCATGGTGTTCTTCCTTAATGTCTTTATCATGTTCATTTAGCCGATGCAACAAGGTGTTGTGTAAAGGGAAGCTTGGAGAAATTGATACACATCAAACAACTTGGTCTGAGAAAATTCCAAGAAGTAGAAGAGGCCATATGAAAGACTATTGGAAAATTTATACAGAATCTTGTGTTGATGCATCACCAATGCTCTGGGAGATCAAACTAGAAGGTCGAATTGAATGTTCTGCAGCAATTGTTTCTGATTTTTCCCAGGTTGTTGTTGGATGTTACAGGGGAAAAATATATTTCCTTGATTTTTCAAATGGAAACATTTGTTGGAGTTTTCAAACATCTGGAGAGGTAAAATCACAACCAGTTGTAGATAGAAGCAGACAACTGATCTGGTGTGGCTCACATGATCATAACTTATATGCTCTTGATTACAAAAACCATTGTTGTGTCTATAAACTACCTTGTGGAGGAAGTATATATGGGTCACCTGCAATTGATGAGGTTTGCAGTGCACTTTATGTGGCTTCTACTAGTGGCCGATTGACAGCTCTATCAATAGGGGATTTTCCATTTAATATTTTGTGGTTCCATGAATTAGAAGTCCCTGTTTTTGGTTCTCTGGGAGTCACTCAGAATGGAATTGTTATATGTTGCTTGGTAGATGGTCATGTTCTTGCATTAAAACCCGATGGTTCTATACTTTGGAAGAGAACAACTAATGGTCCAATATTTGCTGGAGCATGCATATCTTCTGCTCTTCCATCTCAGGTGCTTGTATGCTCCAGAAATGGAAGTGTGTACTCAATTGAACTGGAGCATGGGGATCAAGTGTGGGAATACAATGTTGGAGATCCTATTACTGCATCTGCTTATGTTGACGAGCACTTAAAGCTTGAGTCTGACACTTCTCATTATTCAGACAGGTTAGTTTGCATTTGTTCCAGTTCTGGAGGCATATACGTTCTTCGAGTAAACTTGAATGTCTCGGAAGATGCAAATCAACGGAGAGCGAGTGTGGAGGAATTCGGTCGGCTAAACTTGCCGGGGGATATATTCTCTTCACCTGTGATGATTGGTGGTAGGATTTTTGTTGGTTGTAGGGATGATTGCTTGCACTGCATTGCCCTTGAAATTGCAAGCTGA 3639 0.3875 MNEKSKRRETKTCCISHEFFRVASANPNKIAVIHASGVAQFSRELREKSTSSNFHRDIIELLDKRAESISPPVYAGDSCYTYSDLLKAVHSLSSRLRSILLGADDPYLIRPKAQGSTDVNRKEGSTVQTLNSSKILMPSGETKADPNKEYRPKIVGIYMPPSVEYIVAVLSVLRCGEAFLPLDPFWPKGRILSIISSSKADLIIKSRSSFGNSNSDWLDESYWLVDSSCCPLLNFSMEENLQECPTDLAWPCEIEKQRSFCYLMYTSGSTGKPKGVCGTEEGLSNRFFWMQGIYPLDGPDLLLFKSSISFVDHLQEFLSAILTASVLVIPPFCELKDNVYSLIDFLQRATHSEKFKAYFINRLTAVPSLMRTILPVLQAHVDMRVRSSLKLLVLSGENFPLTLWEMLSTLLPKTSILNLYGSTEVSGDCTYFDCKRMPMILKTEILTSVPIGLPISNCDVLLLGENDASNEGELYVGGSCISRGYYTLSNLMSDQFVKLPRSYGCGGRVDTCQSQLYFRTGDLAKKLPSGDFVFLGRKDRMIKVNGQRVALEEIENLLREHPDINDAAVICQNNEGELLHLEAFIILKDMERLGELLTPSIRSWMINNLPSVMVPNRFIFTESFPMTSSGKVNYELLAGSTLFTKHAQDKVGNLGCSNLLQLVKKELKIRVEFSDAYFTDNARNLYTRSSSPYKNEEIALLLHEQEFCDALMVEEVSNDEDFFQMGGNSLAAAHVAHNLGIDMRFLYYFPSPFKLCIALIQKRGSCPMHNNLDSCSKLNVDRQSNSFSSYLSENANLLEPRQISKYDGSSSSPLKRLRRDLTTDITSGGDKYIPWCSSLMSLSCSFSRCNKVLCKGKLGEIDTHQTTWSEKIPRSRRGHMKDYWKIYTESCVDASPMLWEIKLEGRIECSAAIVSDFSQVVVGCYRGKIYFLDFSNGNICWSFQTSGEVKSQPVVDRSRQLIWCGSHDHNLYALDYKNHCCVYKLPCGGSIYGSPAIDEVCSALYVASTSGRLTALSIGDFPFNILWFHELEVPVFGSLGVTQNGIVICCLVDGHVLALKPDGSILWKRTTNGPIFAGACISSALPSQVLVCSRNGSVYSIELEHGDQVWEYNVGDPITASAYVDEHLKLESDTSHYSDRLVCICSSSGGIYVLRVNLNVSEDANQRRASVEEFGRLNLPGDIFSSPVMIGGRIFVGCRDDCLHCIALEIAS 1212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1609 1212 CDD A_NRPS 151 637 - -
Sto1g1609 1212 Gene3D - 696 751 IPR036736 -
Sto1g1609 1212 Pfam AMP-binding enzyme 154 544 IPR000873 -
Sto1g1609 1212 Pfam AMP-binding enzyme C-terminal domain 553 631 IPR025110 -
Sto1g1609 1212 Pfam PQQ enzyme repeat 920 954 IPR002372 -
Sto1g1609 1212 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 890 1206 IPR011047 -
Sto1g1609 1212 ProSitePatterns Putative AMP-binding domain signature. 263 274 IPR020845 -
Sto1g1609 1212 PANTHER EBONY 4 1209 - -
Sto1g1609 1212 Pfam PQQ-like domain 1004 1161 IPR002372 -
Sto1g1609 1212 Gene3D - 539 647 IPR045851 -
Sto1g1609 1212 Gene3D - 863 1020 IPR015943 GO:0005515
Sto1g1609 1212 Gene3D - 1021 1209 IPR015943 GO:0005515
Sto1g1609 1212 ProSitePatterns Phosphopantetheine attachment site. 724 739 IPR006162 -
Sto1g1609 1212 SUPERFAMILY Acetyl-CoA synthetase-like 71 637 - -
Sto1g1609 1212 Gene3D - 126 538 IPR042099 -
Sto1g1609 1212 SMART ire1_9 911 944 IPR018391 -
Sto1g1609 1212 SMART ire1_9 1040 1070 IPR018391 -
Sto1g1609 1212 SMART ire1_9 1082 1113 IPR018391 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g1609 Sto-Chr1 23940140 23959387 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g1609 252 637 Acyl Lipid Metabolism Gene Families AT5G36880 22.444 4.53e-14 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1609 K00142 - gmx:100820175 1653.26