Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1605 ATGGCGGAACAAGAACAAAATTGTCTCCCACAAGTGCTAGTTCTTGGCACCCCTCCACCTGGCTTCTCCATCCTCCGATCCCAATACTCTCACAAGTTCCATTTTCTCAGTTTCTTCAAACCCTCCGAACTCTCCCTCCACCAATTCCTTGCGTCACACCACCGCTGTGACCCTTCTTCCATCCTCGCCATCCTCTGTGGGGCCCAGGATCCCGTCGCCGGCGAGGTGCTCCGCCTACTCCCGTCGCTCGGCGTCGTCGTCACCACCAGCGCCGGGACGAACCACATAGACTTGGCCGAGTGCCGCCGCCGGGGAATCCTCGTCGCCGGTGCCGGTGGCGCGTACTCCGAGGATGTCGCCGACGTGGCTGTGGGGTTGTTGATTGATGTTTTCAGAAAAATTTCGGCGGCGAATCGGTGCTTCTTGATGAAGTCAAGGATGCAGTTCACTCCGGGGGATTTGCTTCTTGGGTCCAAGGTAGGAGGAAAGCGAGTAGGCATAATTGGATTGGGAAGCATTGGCCTGAAAACCGCAAAGAGGCTAGAGGCATTTGGTTGCATCATAACGTACCACTCAAGGAATAGAAAGCCTTCAATTCCATACCCTTTCTATCCCAACATTTTGGATCTTGCACTTGCTAGTGATGCACTTGTGCTATGCTGTGCACTGAATGAACAAACGAAGCACATAGTCAATAAGGAAGTGATGGTGGCATTAGGGAAAGAAGGGATCATTGTGAATGTGGGAAGAGGGGGTCTCATTGATGAAGAGGAAATGGTCAAGTGTTTGGTGGGAGGAGAGATCGGAGGTGCTGGTTTGGATGTGTATGAGAATGAGCCTCTTGTTCCTCAAGAGCTCTTTGATTTGGATAATGTGGTTTTGTATCCACATTCAGCTGCTTTCACTTCGGAATCTATTGTGGGTGTTGTTGAGGTTGTGGTGCAAAATTTAGAAGCCTTCTTCTCAAATAAGAGTTTGGTTACTCCGCCAACTGACAGAGGAATGTGCTCTGCTTTTTCAAGCTCCTGA 1029 0.5073 MAEQEQNCLPQVLVLGTPPPGFSILRSQYSHKFHFLSFFKPSELSLHQFLASHHRCDPSSILAILCGAQDPVAGEVLRLLPSLGVVVTTSAGTNHIDLAECRRRGILVAGAGGAYSEDVADVAVGLLIDVFRKISAANRCFLMKSRMQFTPGDLLLGSKVGGKRVGIIGLGSIGLKTAKRLEAFGCIITYHSRNRKPSIPYPFYPNILDLALASDALVLCCALNEQTKHIVNKEVMVALGKEGIIVNVGRGGLIDEEEMVKCLVGGEIGGAGLDVYENEPLVPQELFDLDNVVLYPHSAAFTSESIVGVVEVVVQNLEAFFSNKSLVTPPTDRGMCSAFSSS 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1605 342 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 63 326 IPR006139 GO:0016616|GO:0051287
Sto1g1605 342 Gene3D - 47 324 - -
Sto1g1605 342 PANTHER D-ISOMER SPECIFIC 2-HYDROXYACID DEHYDROGENASE FAMILY PROTEIN-RELATED 7 329 - -
Sto1g1605 342 Pfam D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 125 299 IPR006140 GO:0051287
Sto1g1605 342 CDD HPPR 10 322 - -
Sto1g1605 342 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 165 192 IPR029752 -
Sto1g1605 342 PANTHER 2-HYDROXYACID DEHYDROGENASE-RELATED 7 329 - -
Sto1g1605 342 SUPERFAMILY Formate/glycerate dehydrogenase catalytic domain-like 63 139 - -
Sto1g1605 342 Gene3D - 116 302 - -
Sto1g1605 342 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 116 300 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g1605 Sto-Chr1 23887684 23891582 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1605 - K15919 gmx:100776772 388.267