Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1531 ATGGGCTTTCTCTCCTCATCCGTTGAAAGAATCTCCAAGTATAAACCTGGGCGCACTGTGGGTTACTTTATTAACTATAAATCCAATCTGACGGAACTCCAGCGACAAGTTGAGGATCTGAAGCGACTGAGATATCGGCAGCAACATAACGGAGAAGCAACTATTCATGATGAGGAAGTTCTTCGTCTGATTCAATATGGGCAAAAATTGCTGGAGCGACCGAGAGCATGGTCATTGCATCGTTGTAGGTTTAGTAGGGAAGTGCGGGAGACAATGGAAGAAATTTCTAGACTACTCAGTCTAAAGGTTGAAAATCCCTCTTACGGGCCTGGGTTTGACTTAAGGATGAGTACTTTCTGGGAGGTTATGCAATCACTGAAAGATGACAATGTCAGATTGATCGGGGTGCATGGAATGAGCGGCGTGGGAAAAACCACACTTGTGAAAGAAGTGAGCAGATATGCTGTTGAGGAGGGGTTATTTGATGCCATAGTCTGGTCAGTAGTAACTCCTGCACCGGATGTGATAAGAATTCAAGATGAAATTGCAGAAATCTTGGGTTTGAGACTTCATCTCACTCAGAGTCAATCAGAAAGGGcagataaaatttataaatggcTAACAAACAATAGGGAGAGAAAATTCCTTATTATTTTAGATGATGTCTGGGATCACCGTGATTTGGAAGGTATAGGAATTCCAATGGCTGGTGATTGTGTGCCATTCAAGGTACTCCTAACTTCAAGGAATATAGAAATACTACGGAATGTTAATTCTGGGATGAATGTTATCCATGTGACAATCTTACCTAAGGAAGAAGCTTTCCTTTTGTTTAACCAGATTGTTGGAAATACTGCAAGCATATATTCTGATACAGTTCTGGAGATAGTAGAGACTTGTGAGGGTCTGCCCATGGCAATCGAGGTCGTTGCAGAGAAACTAAAGCATGAACCGTTATCTGAATGGAAGTCGACTATTACTGAATTCATTAGTCACATGCTTTCCCGTATAAAATTAAGTTATGATTATTTGAGGAACGAAGAAGAGAAGTTTATATTCTTGCTCTGTAGCATTCTCGGGGAGCAGATTTACTgcCAAGATTTCCCATGTTCCAGGGATCATGAAGCCTTCAAagtattgaaattgaattgcgaTAAGGGCAAAATTGAAGGTTCAAAGCATTGGATTGAATCTCTGTTGAAGAGTTGTGAAGAATTATGGTTAAAGGAATTCAAGGATTTTGAAAATGTTCTTTCAGAGTTAAACGGGGATGCCTTTCTAGAGTTGAAGCATCTTCGTATCCAAGATAACGCTGAACTAGAACACCTCCCTTCAAAAGTTGTCTTTGATACTCTTGAGACACTTGTTCTCAAGAATTTGCTCAATTTCAGAGTTATACAATCTTGTGACAGTGAGTTCTTGTGTTCCTTCAAAAATTTAACAATTGTGAAAATAGAATGTTGTCCTTTGTTGGAAAGCATCTTCAACTTATCAGCACATAATGGCCCATTCCAACTCAGAGAACTGGAGATAAGTCAGTGTACAAAGATGGTAGCTATAGCTAATAACAGCCGAGATGACGTGAAATTTGTTGATGGACAACTTTTCTTTGACGGAGTGCCTAGCGCCTTTGGGTTCCCTTGTTTGCAAACATTGACACTGCAGGATCTGGATAATCTTATCGGATTCTTTAAATGCGCGGCAGGCGGCAGGGAAATCATCTCGGCAGAGGCCAATATGTATTCTGGTTCACTCTTTCTTAACTTGGCTGCTGCTCTCCCTCACTCTAAGCATTTGAAGTTGATCAACATACCTAAAATAAGACATTTGGTTGCGTCGACTGCAGCTGACTGGGTTGTACCTCTGCAAGATTTGGAAACAATGGAAATTGTTGAATGCAATGATCTCTGCCATTTATTTGTCACTGAAGGCCGttttgatgaaaattatggtggACTACTACCCGAGTTACGTCAACTTTGCTTACGTAACCTAGGTAACTTTAGAAGCATACTAAGCAACGATCATCCCCGgagaatattgaattttaaaatgttgaatCAGCTAACAGTGCATAATTGTAATCAACTGAGGTATCTTCTTCCTCATTATGTCCTCAATAATCTTATGCAAGTCCGAAGTATTGATATAAGTGACTGTGCGATGTTGGAACAAATTTTTGGATATGAAGAAGATATAATAATGGGTGAGTCAAAGAATAACGAGATGTTACCCCTCTTGCACTCTCTTAAGCTCAGCAATTTGCCAAAGCTTGCTAGTATTTGTTCAGGAGTTCGTCATCCTATCAATCTTCGCCTGAAACAAATGGCCATTGAAGACTGTCCTAATTTGGCTTTTACTTTTGCGCATTCACGGACACAGGCTGACGAAAAAGAATCTTCCATGGAATCTGAAGGGATAATCATAGTCCCTTCACTACTGGAGAATGTGAATCTCCGTCAGCTGAATCATTTGAAAACTATGTGGAAAGATCACCTGCTTAGTTTTATGCATCTGAGATCTCTGCAACTGCATGGATGTGACAATTTGGTTTATCTGTTTTCATTATCAGTAGCTCGAGGGCTTTCTTGTCTCCAGGAGCTTAAGATAATTTCATCCACAAGGGTTGAACAAATTGTAAGAGGAGAAATGGGAGTAACAGCAAGCGCATATACTGTTGAATTCCCTCGGGTGAACACCTTAATTCTTGAAGATTTACCTAACATGACTCAATTTTGCGACCATGAGTTTACCGTTAAATGGCTCTCATTGAAGGTGATAAGAGTGGTTGGGTGTCCCAATATTAGAAAGTTTTCTCTGGGAATGGTAGACATTCATCAATTCACGTCAGTGGACGTCGTTTTCAATTTCTCCAACCAAAGGGAAATTGATGACCTAATAGCCATTTCTCATCTCTTTAAGTTAACTGATAAACTTTCAAGTCTTGAAGAGTTAATTATCGAAGGCTTAGAggaattgaaaaatataatggaagcgCAGCTGAAGCCTTCATTTTTCACTAACTTGAAGATGCTAGAGGTCAGACAGTGCGATAATAAGTTAAATGTCTTTTTGTCCATTTTACTACCCAGGTCATGTAGGCTTGAGTGCCTAACAGTGGAAAATTGCAAACTGCTGGAGCTAGTTTTTGACCTTAAACACTTGGTTGCTGATGGAGAAGGAAATGGGTTATTCCCCAATTTAAAAACAATGAGATTGTTAGATTTACCAAAGTTGAATTACATATGGAACATGGATCCAAGTGGAATTATGGACCTTCGGAAACTAGTTAAATTGGAAATCATCAATTGTGGCTTACTAAGGAATCTTGCTTCGATTGGTGTTGTAGAAACTCTTGTGCAACTAAAGATATTAGCTGTACATTCTTGTAAGATGATAGAAGAAGTTATAACCATCAAGGTAGGAGAGAAGACGGACAAGGAGGGAAGATGTTTTCCTAATTTAAGGGATCTTGTGATTGCGAACCTCCCAAATTTCAGAAGGTTCAACTCAGGGAATTGCAAGTTTAGATTTCCGAATCTGCTCAGTTTGAGGATAAAGCACTGTCCTAAGATTAATGCATTTACTACTGGATTTTTAAGCGCGCAGGGACCAACTATTAATTCTAGGACAACGGAACATGCATTTGACGAGATGATGGATGTGTACCCAAATTTGAAGATATTGGAACTCTTAGGCCTCGACTCATTGAAGGTGATATGGCAGGGGTTCGATTCGACAAAATCATTCTCTGAGCTGGAAGAGCTAGAAGTGGATACCTTATGTAATCTGGAATATATCTTCCCCTCGAGTATGTTGCCAAGGTTGAAGAAGTTGAAGACACTCTTTGTGAGGAACTGCAGTTCACTGAGAAATGTGTTCCTACTAACTGAGAAACAGGATATCAAGCTATCCATGGCCTTTCAAAACCTGAAGATTGTACAAGTACAAAGCTGTGATTCTCTTAGACACATGTTATTACCCTCCAACTGTCTCAATCTGGAAGCATTAGAGATTTCTGAGTGTAAGAATTTGGAAGAAATTTTCATTGacacagaagaagaaaaaagggaTGCGAAGGTTCTCCCTCATTTGAAATCTATCATTCTTGAAAATCTACCAAAGCTTTCAAACTTCTCTTTGGAGACATTTAAGTTTCCGTCACTGGTAAAAGTGAAGATAGTTGAGTGTCCTGCGCTCAAGGCATTTAAACCAGGGTCGACAAGAAATGTTTCAGCTCCAGTGAACAACTTCTTCTCGGATATGGATAATTTTGAGAAACTAAAGGAATTGCATCTTACAAATGTCGCCGGATGTCAGAATATATGGAATAATGATCTATCTTCAGGGTCACTATGTGAATTGCAGATCATAAATCTGTGCAAAAGCACGGTGTTGAACATCGTCTCATCTAACATGCTGACAAGGTTGCTGAAGCTTGAGAAGATTACTGTACAGAGTAATGAATTAGAAGTGGTATTTGACATTAATGAGAATTCACTGCCTGACATCGGTGAAATGGAATTGCTGCCTCAGTTATATGAACTGGTATTGATTGACCTGCCCTACATGGAATTGTGGAAACAGGAACCTAAAATTCCCGTGTTCAGAAATTTGACTTCACTTGAAATCATCCGTTGCAAAAGCATAAAAAAGTTGTTCTCCACTTCAGTGGGTAAAAACCTTGACGCACTGAAATTGCTAAAATTATATGAGTGTATAAATATGGTACAGGTTCTTCAAGGAGGAGGAGAAAGGGGTCAAATTCTTTTCAATAATTTGGAGTGCCTTATACTCAAATATCTACCATGTCTCACAAGTTTTTGTGAACAAGAAGTTGCTTTTGAATTCCCTAAGTTACAGATGGTTAAGGTGGAAGGTATTCCAAACATGGAGACATTTGTTAAGGGGTTTCTGACAACACCAAAACTGAAAGAAGTTTATACTACAGATATTAGAAAATGCTGGCAAGGGGAGCTGAACGCAACCATAAAATGGTTGTACCAAAATCAAGatTTTAGAGATGATGATTATATTCGAGACGGCATTGGCACCTCTAATCAACCTGCATTCAATGCTACGGATAACTCTGCCCAATTTCCGGTTGAGTCTCATGCTCTTGCCATTGCCTTGGATGGAGGTGGCAATGTTGTACCTCTTTTATCCCCAGCCCCTCTTCCTGAGGGCGATGGTGAGGTAGCCATGTTTGATGTGGAAGAAGGAGGGTGTGAAGTCTGTGAGGGTGGCCAACAATCTGGGGAGGCCACACACAAACATGGCGACCAAGATGATGATGACAATGTTCATGTCGTTCCAAGGCACCTAGTGGAAAGACAAGATCAGGAGGCCTCACTTTTGACTGGTATGCCTACTTCCCAAGATGCAGTGAAGTCTAACGTTGTTGAGATTCTGCCATTGTCATCTCCAGCTGCTCCTCAAGAGACGGAGCCTCCTTCCCCTGGGACCACTTGTGCTTTAAAGGTGCCCGAGGTCCGGGAGATAGTGGAACTGATGAAACTTGAAGGCGTTGAGTCCTTGATGCTAGGAGAAGCATTCAAAACTTATCCCCAATTGTGCCTTTCCCGAGAGGATCGAAGTGACCATTTGCTGTCTTTCTCATACAGGGTGTTGCTtgacattttaaatattttggatTCTAGGACACCTCTCACAATCACAGAATCAGACAAGAAGTCGTTGGAGAAAAATCTGAAGGATGCTTTAGTCCTCGGTTTTGATAAGGATTGGCTTGAATCAACTAGAGGCAAAGTGTTTGACTGTGACTTATCGGAGGTTAATCAGGCCCGGGAAGTTCTAGAGTGGTTGGAGGGTGAGTTGGAGTCTAATGAAGCGGCTCTTGCAGCTGTTTGTGATGAGGAAACAGAGGCCATACGAGCAGTAGAGGCAGCTCAAGAGGAGATTGTTACCCAGTTGTGTTTTGACACGTGTCAACAGGAAGTTGGGACTAAACTCTTGGACGCGCGCCGAGACATGGTAGCGAAGCGTGATCAGTGCCTGCAAATAATTGCTGCCAAGGATAGGCATTTTGGATTCTACAATCTTCTTCAAAGGGAAGGTTTATATGTTCCTAATGGTTTTTATTCTTGGAAAAAGAATATGGAAAACCCATATTCCACCAAGAATTCACTTGTTCATACAGAGGCTAATGATGATGCTGGCATGAATGAAGAGACAAGGGATATCTTCTTACATAGTCCTCTAGCCAAAGCCGTGTGGTTTGGTTTGGGTTGA 6252 0.3994 MGFLSSSVERISKYKPGRTVGYFINYKSNLTELQRQVEDLKRLRYRQQHNGEATIHDEEVLRLIQYGQKLLERPRAWSLHRCRFSREVRETMEEISRLLSLKVENPSYGPGFDLRMSTFWEVMQSLKDDNVRLIGVHGMSGVGKTTLVKEVSRYAVEEGLFDAIVWSVVTPAPDVIRIQDEIAEILGLRLHLTQSQSERADKIYKWLTNNRERKFLIILDDVWDHRDLEGIGIPMAGDCVPFKVLLTSRNIEILRNVNSGMNVIHVTILPKEEAFLLFNQIVGNTASIYSDTVLEIVETCEGLPMAIEVVAEKLKHEPLSEWKSTITEFISHMLSRIKLSYDYLRNEEEKFIFLLCSILGEQIYCQDFPCSRDHEAFKVLKLNCDKGKIEGSKHWIESLLKSCEELWLKEFKDFENVLSELNGDAFLELKHLRIQDNAELEHLPSKVVFDTLETLVLKNLLNFRVIQSCDSEFLCSFKNLTIVKIECCPLLESIFNLSAHNGPFQLRELEISQCTKMVAIANNSRDDVKFVDGQLFFDGVPSAFGFPCLQTLTLQDLDNLIGFFKCAAGGREIISAEANMYSGSLFLNLAAALPHSKHLKLINIPKIRHLVASTAADWVVPLQDLETMEIVECNDLCHLFVTEGRFDENYGGLLPELRQLCLRNLGNFRSILSNDHPRRILNFKMLNQLTVHNCNQLRYLLPHYVLNNLMQVRSIDISDCAMLEQIFGYEEDIIMGESKNNEMLPLLHSLKLSNLPKLASICSGVRHPINLRLKQMAIEDCPNLAFTFAHSRTQADEKESSMESEGIIIVPSLLENVNLRQLNHLKTMWKDHLLSFMHLRSLQLHGCDNLVYLFSLSVARGLSCLQELKIISSTRVEQIVRGEMGVTASAYTVEFPRVNTLILEDLPNMTQFCDHEFTVKWLSLKVIRVVGCPNIRKFSLGMVDIHQFTSVDVVFNFSNQREIDDLIAISHLFKLTDKLSSLEELIIEGLEELKNIMEAQLKPSFFTNLKMLEVRQCDNKLNVFLSILLPRSCRLECLTVENCKLLELVFDLKHLVADGEGNGLFPNLKTMRLLDLPKLNYIWNMDPSGIMDLRKLVKLEIINCGLLRNLASIGVVETLVQLKILAVHSCKMIEEVITIKVGEKTDKEGRCFPNLRDLVIANLPNFRRFNSGNCKFRFPNLLSLRIKHCPKINAFTTGFLSAQGPTINSRTTEHAFDEMMDVYPNLKILELLGLDSLKVIWQGFDSTKSFSELEELEVDTLCNLEYIFPSSMLPRLKKLKTLFVRNCSSLRNVFLLTEKQDIKLSMAFQNLKIVQVQSCDSLRHMLLPSNCLNLEALEISECKNLEEIFIDTEEEKRDAKVLPHLKSIILENLPKLSNFSLETFKFPSLVKVKIVECPALKAFKPGSTRNVSAPVNNFFSDMDNFEKLKELHLTNVAGCQNIWNNDLSSGSLCELQIINLCKSTVLNIVSSNMLTRLLKLEKITVQSNELEVVFDINENSLPDIGEMELLPQLYELVLIDLPYMELWKQEPKIPVFRNLTSLEIIRCKSIKKLFSTSVGKNLDALKLLKLYECINMVQVLQGGGERGQILFNNLECLILKYLPCLTSFCEQEVAFEFPKLQMVKVEGIPNMETFVKGFLTTPKLKEVYTTDIRKCWQGELNATIKWLYQNQDFRDDDYIRDGIGTSNQPAFNATDNSAQFPVESHALAIALDGGGNVVPLLSPAPLPEGDGEVAMFDVEEGGCEVCEGGQQSGEATHKHGDQDDDDNVHVVPRHLVERQDQEASLLTGMPTSQDAVKSNVVEILPLSSPAAPQETEPPSPGTTCALKVPEVREIVELMKLEGVESLMLGEAFKTYPQLCLSREDRSDHLLSFSYRVLLDILNILDSRTPLTITESDKKSLEKNLKDALVLGFDKDWLESTRGKVFDCDLSEVNQAREVLEWLEGELESNEAALAAVCDEETEAIRAVEAAQEEIVTQLCFDTCQQEVGTKLLDARRDMVAKRDQCLQIIAAKDRHFGFYNLLQREGLYVPNGFYSWKKNMENPYSTKNSLVHTEANDDAGMNEETRDIFLHSPLAKAVWFGLG 2083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1531 2083 Gene3D Ribonuclease Inhibitor 974 1298 IPR032675 -
Sto1g1531 2083 Gene3D Ribonuclease Inhibitor 365 732 IPR032675 -
Sto1g1531 2083 Gene3D Ribonuclease Inhibitor 1299 1412 IPR032675 -
Sto1g1531 2083 Gene3D Ribonuclease Inhibitor 1413 1655 IPR032675 -
Sto1g1531 2083 Gene3D Ribonuclease Inhibitor 744 965 IPR032675 -
Sto1g1531 2083 Gene3D - 268 345 IPR042197 -
Sto1g1531 2083 Gene3D - 92 267 IPR027417 -
Sto1g1531 2083 PANTHER - 810 887 - -
Sto1g1531 2083 PANTHER - 1305 1407 - -
Sto1g1531 2083 PANTHER - 835 945 - -
Sto1g1531 2083 PANTHER - 655 784 - -
Sto1g1531 2083 PANTHER - 1218 1294 - -
Sto1g1531 2083 PANTHER - 20 361 - -
Sto1g1531 2083 PANTHER - 1080 1200 - -
Sto1g1531 2083 PANTHER - 392 640 - -
Sto1g1531 2083 PANTHER - 1536 1663 - -
Sto1g1531 2083 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 356 IPR027417 -
Sto1g1531 2083 SUPERFAMILY RNI-like 1420 1649 - -
Sto1g1531 2083 Coils Coil 23 50 - -
Sto1g1531 2083 PRINTS Disease resistance protein signature 133 148 - -
Sto1g1531 2083 PRINTS Disease resistance protein signature 209 223 - -
Sto1g1531 2083 PRINTS Disease resistance protein signature 300 314 - -
Sto1g1531 2083 PRINTS Disease resistance protein signature 707 723 - -
Sto1g1531 2083 SUPERFAMILY RNI-like 1063 1348 - -
Sto1g1531 2083 SUPERFAMILY L domain-like 377 873 - -
Sto1g1531 2083 Coils Coil 1932 1952 - -
Sto1g1531 2083 PANTHER RPP4C3 1536 1663 - -
Sto1g1531 2083 PANTHER RPP4C3 20 361 - -
Sto1g1531 2083 PANTHER RPP4C3 655 784 - -
Sto1g1531 2083 PANTHER RPP4C3 810 887 - -
Sto1g1531 2083 PANTHER RPP4C3 1218 1294 - -
Sto1g1531 2083 PANTHER RPP4C3 1080 1200 - -
Sto1g1531 2083 PANTHER RPP4C3 835 945 - -
Sto1g1531 2083 PANTHER RPP4C3 1305 1407 - -
Sto1g1531 2083 PANTHER RPP4C3 392 640 - -
Sto1g1531 2083 Pfam NB-ARC domain 121 343 IPR002182 GO:0043531
Sto1g1531 2083 SUPERFAMILY RNI-like 810 1047 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g1531 Sto-Chr1 22866548 22882377 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1531 - - jcu:105635055 389.808