Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1202 ATGGGTTTTGGGAGTGAGAGCCATCATCAGCTTCTGTCCAAGATTGCTACAAATGACAAACATGGAGAGAATTCTCCATATTTTGATGGGTGGAAGGCATATGATAGGGATCCATTTCACCCTACAGAGAATCCCCATGGAGTTATCCAGATGGGTCTTGCAGAAAATCAGcTCTGCGTTGATTCGATTGAAGAATGGATAAGGAACAACCCCAAGGCCTCCATTTGTACTCCAGAAGGAGTGAACCAATTCAGAGATATTGCCAACTTTCAGGACTATCATGGACTCCCAGAATTCAGAAATggTGTGGCGAATTTTATGTCAAAAGCGAGAGGTGGTAGGGTCAAATTTGATCCTGACCGTATATTGATGAGTGGCGGAGCTACGGGCGCAAATGAGCTCATCATGTTCTGTTTGGCTGATCCTGGAGACGCTTTTCTGGTTCCTTCGCCTTACTATCCAGCATTTGTTCGTGACTTGTGTTGGCGAACTGGGATCCAAATCATTCCTGTACACTGTGACAGCTCCAATAACTTCAACATAACCAGAGAAGCACTGGAAGAAGCTTACAAGAAAGCCAAAGAAGACAACATCAACATTAAGGGTTTGATCATAACAAACCCATCAAACCCTCTAGGCACCACCTTGCACAGAGAGACACTAGAGAGCTTGGTGAGCTTCATCAATGATAAGAATATCCATTTAGTCTGCGATGAGATCTACGCGGCCACGGCGTTCGGCTCTCCGAGCTTCGTAAGCATCTCCGAAATCGTACAAGAACTCGAGTGCTGCAATCTTGACCTCATCCACGTTATATATAGCTTGTCTAAGGACCTGGGCCTTCCCGGGTTCAGAGTAGGGATAGTTTATTCCTACAACGACAATGTGGTGAGCTGCGGCCGGAAAATGTCGAGCTTCGGGTTGGTGTCGTCGCAAACTCAGCACTTGCTCGCCGCGATGCTCAATGACGGGGAATTCGTCGAGGAGTTCCTGGCTGAGAGCTCGAGGAGGTTGGCGAAGCGGCACGGTTTCTTCACGAAGGGGCTTGAGAAAGTGGGGATTACTTGCTTGCCAAGCAACGCGGGGCTCTTCGTGTGGATGGACTTGAGGAAGCTCTTGAAGGATCAAACGTTTGAAGGAGAGATGATGCTATGGCGCAGCATTATCAATGAGGTGAAGCTCAACGTGTCTCCCGGCTCGTCTTTCGACTGCATCGAGCCggggtggtttagggtttgcttcGCTAACATCGACGACGAAACCGTGGAAATCGCTCTGAGGAGGATCAGAGCGTTTGTGGGCAGGGAAACGGAGAAAAAACCAAAGAAAGTCAAGCGCTGGCAAAGCAATTTGAGGCTTAGCTTCTCTTCCTCAAGAAGACTAGAGAAGCGTGAATTCACGTTTTACCAACAAGAAGGCATTTGCCTATCCACTTCAGCTCGGCTGAAGGAGTACAAGCAAAGCATGCAGAAGGATGCCAAGGGATTATCACTCATTCAACAAGGAGTAAGTAATACCATTTTCCCAAGAATCATGAATGCAAAAACTGCAAAAGAGGCTTGGGAGATATTAAAAGGCCAATACAAGGGCTCAGATAAGGAAGGCGAATCAATTCAAGCATTCTTCTCTCATGTCTCTAATATTGTCAATCAAATTAGAAGCGACGGGGACACgataaaagataagaaaattgttcaaaaaattttaagaagccTTCCTGCAAAATTTGATCATGTGGTGGCTACTATTGAAGAAGCCAAGGATATGACAAAGCTCACTCTAGTGGAACTAGAAGGATCTCTTCGAGCACATGAAGAGAGAATGCAAAAATGTGAAAAACCACTAGAGCAAGCTTTTGAGTCAAAAATAAATGTATCTAAAAATAATGGAGATAAAAGAAATGACCATGGTCAAAATCCTCAAAATAGATGA 1932 0.441 MGFGSESHHQLLSKIATNDKHGENSPYFDGWKAYDRDPFHPTENPHGVIQMGLAENQLCVDSIEEWIRNNPKASICTPEGVNQFRDIANFQDYHGLPEFRNGVANFMSKARGGRVKFDPDRILMSGGATGANELIMFCLADPGDAFLVPSPYYPAFVRDLCWRTGIQIIPVHCDSSNNFNITREALEEAYKKAKEDNINIKGLIITNPSNPLGTTLHRETLESLVSFINDKNIHLVCDEIYAATAFGSPSFVSISEIVQELECCNLDLIHVIYSLSKDLGLPGFRVGIVYSYNDNVVSCGRKMSSFGLVSSQTQHLLAAMLNDGEFVEEFLAESSRRLAKRHGFFTKGLEKVGITCLPSNAGLFVWMDLRKLLKDQTFEGEMMLWRSIINEVKLNVSPGSSFDCIEPGWFRVCFANIDDETVEIALRRIRAFVGRETEKKPKKVKRWQSNLRLSFSSSRRLEKREFTFYQQEGICLSTSARLKEYKQSMQKDAKGLSLIQQGVSNTIFPRIMNAKTAKEAWEILKGQYKGSDKEGESIQAFFSHVSNIVNQIRSDGDTIKDKKIVQKILRSLPAKFDHVVATIEEAKDMTKLTLVELEGSLRAHEERMQKCEKPLEQAFESKINVSKNNGDKRNDHGQNPQNR 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1202 643 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 274 287 IPR004838 GO:0003824|GO:0009058|GO:0030170
Sto1g1202 643 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 51 77 - -
Sto1g1202 643 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 84 100 - -
Sto1g1202 643 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 121 141 - -
Sto1g1202 643 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 143 164 - -
Sto1g1202 643 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 197 221 - -
Sto1g1202 643 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 233 256 - -
Sto1g1202 643 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 268 292 - -
Sto1g1202 643 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 300 323 - -
Sto1g1202 643 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 9 450 - -
Sto1g1202 643 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 9 450 - -
Sto1g1202 643 MobiDBLite consensus disorder prediction 626 643 - -
Sto1g1202 643 CDD AAT_like 89 431 - -
Sto1g1202 643 Gene3D Aspartate Aminotransferase, domain 1 37 428 IPR015422 GO:0003824
Sto1g1202 643 Pfam gag-polypeptide of LTR copia-type 533 610 - -
Sto1g1202 643 Coils Coil 176 203 - -
Sto1g1202 643 MobiDBLite consensus disorder prediction 619 643 - -
Sto1g1202 643 Pfam Aminotransferase class I and II 49 429 IPR004839 GO:0009058|GO:0030170
Sto1g1202 643 SUPERFAMILY PLP-dependent transferases 17 434 IPR015424 -
Sto1g1202 643 Gene3D - 71 323 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g1202 Sto-Chr1 16371864 16396127 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1202 K20772 - gmx:100775969 774.237