Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g1096 ATGccgaagaaggaagaagagttTAACGCTGAGGAAGTGATAGAGGAATTTGAGTATCTGACCAAGAATGCTGAGGCGGTTCAGAAGGAGACACTGAGAAGGATTTTAGAAGCTAATGCATCAGCAGAATACCTTCAAAGTTTGGGTCTCAATGGACGAACTGACCCAGTGATTTTCAAAGCTTGTGTTCCTGTAGTTACACACAAAGAATTAGAGCCTTACATTCAGAGAATCATTGATGGTGATGATGCTGCTTGTATTCTCACAGGAAAACCCATTACAACCATTTCATTGAgttctgGCACTACTCAGGGGAAGTCAAAATTTGTACCTTGGAATGATGAATTGTTTGACACTACAATGCAGATATACCAGACTTCTTTTGCTTTCAGGAAGAGACATTTTCCTATAAACAATGGTAAGGTTTTGAGCTTCATCTACGCCAGCAGGCAGTTCAAAACCAAAGGGGGCTTAATTGCTGGAACTGCCACCACAAATTTGTTCCGCGATCCGCGATACAAAACATCAATGAAGGCAATTCAATCCCAGCATTGCAGCCCAGATGAAGTAATATTATCCAGCTCCGATTTCCAGCAATCTCTGTACTGCCATCTCTTATGTGGACTCATCTCAAGAGAGCATGTTCAAGTTGTAAGCTCCACGTTTGCACACAGCATAGTGCACGCCTTCAGATTCTTCGAGCAAGTGTGGGAGGAGCTTTGTACTGATATTCGAGAAGGGGTCCTCACAAGCCGAATCACCGATCCCTTGATCCGAGCTGCCATGGCTAACTTGCTCGTCGAACCGAACCAAGAATTGGCCAGTTCCATACATGACAAGTGTGCGGGTTTGAGCGATTGGTACGGGCTAATACCGCAGCTTTTTCCCAATACCAAGTTTGTGTATGGGATCATGACTGGGTCTATGGAGCCTTATTTGAAGAAGCTGAGGCACTATGCTGGATGGATAGGAGCGAATGTGAACCCGAGAGTGGCTCCAGAATCGGCTACTTATGCCGTGCTTCCTCAAATTGGCCTATACCGATACAGGCTCGGCGATGTAGTGAAGGTTATGGGATTCCATAACTCGACGCCAGAACTCAAGTTTGTTCGTCGGGCCAGTCTTCTTCTATCGATAAACATCGACAAGAACACCGAGAAGGACTTGCAGTTAGCCGTGGAAGCAGCGACCGAATTATTAGCTGAAGACAAACTTGAAGTTGTAGACTTCACAAGCCACGTTGACTTGTCCACAGAACCTGGACACTATGTTATCTTTTGGGAGATAAATGGTGTGGATGATAATGAAGCAAGTGACGAACTACTATCTAAATGCTGCGATCGTTTGGACGAGTCCTTTGTTGATGCAGGCTACAAGAGTGCTCGGAAGGTCAAGTGCATCGGCCCCCTCGAACTCCGTGTCCTTCGGAAGGGAACATTCCAGAAGATTCTACAACATTTCTTGGGATTAGGAGGTGCTGTTAGTCAATACAAGACACCGAGGTGCATTGGCCCCGCAAATAGTGCAGTGTTGCAAATATTGAGTGAGAATGCTGTGAAGAGCTATGTCAGCGCTGCTTTCAACTGA 1587 0.4486 MPKKEEEFNAEEVIEEFEYLTKNAEAVQKETLRRILEANASAEYLQSLGLNGRTDPVIFKACVPVVTHKELEPYIQRIIDGDDAACILTGKPITTISLSSGTTQGKSKFVPWNDELFDTTMQIYQTSFAFRKRHFPINNGKVLSFIYASRQFKTKGGLIAGTATTNLFRDPRYKTSMKAIQSQHCSPDEVILSSSDFQQSLYCHLLCGLISREHVQVVSSTFAHSIVHAFRFFEQVWEELCTDIREGVLTSRITDPLIRAAMANLLVEPNQELASSIHDKCAGLSDWYGLIPQLFPNTKFVYGIMTGSMEPYLKKLRHYAGWIGANVNPRVAPESATYAVLPQIGLYRYRLGDVVKVMGFHNSTPELKFVRRASLLLSINIDKNTEKDLQLAVEAATELLAEDKLEVVDFTSHVDLSTEPGHYVIFWEINGVDDNEASDELLSKCCDRLDESFVDAGYKSARKVKCIGPLELRVLRKGTFQKILQHFLGLGGAVSQYKTPRCIGPANSAVLQILSENAVKSYVSAAFN 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g1096 528 Pfam GH3 auxin-responsive promoter 16 321 IPR004993 -
Sto1g1096 528 Pfam GH3 auxin-responsive promoter 345 503 IPR004993 -
Sto1g1096 528 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 1 345 IPR004993 -
Sto1g1096 528 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 345 528 IPR004993 -
Sto1g1096 528 Coils Coil 10 30 - -
Sto1g1096 528 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 345 528 - -
Sto1g1096 528 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 1 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g1096 Sto-Chr1 13855953 13860112 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g1096 17 525 EF-hand Containing Proteins AT1G23160 34.683 1.21e-115 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g1096 K14506 - gmx:100777944 766.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g1096 1 13855953 13860112 Sto1g1096 1 13855953 13860112 ECH