Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0923 ATGCCGAGTCTAGTTGCCCTCGAAACCCCACCCAAAACGCCGCCGTTTGGCGCCTCCGTTACGGAGTATTCCAATGGCGGCGAACACAGAACCCCATCGCCGTCGCCGCTCGTGAAGCGAGCCTCCAGGAAGACACCGGAGAAGCTTACCGCAGACGAATCCTCCCTCGACAACCCGGATCTAGGTCCGTTTCTCTTGAAGCTTGCCCGAGACACCATAGCTTCGGGCGAGAATCCGAACAAGGCGTTGGACCATGCGATCCGGGCGTCCAAATCGTTCGAGCGGTGTTCCGGTCCGGGGCTGGAGCTTTCCATGTGCTTGCACGTGGTGGCTGCGATCTACAGCAGTTTGGGGCGGTTCGGGGAGGCGATTCACGAGCTGGAGCGGTCCATTGAGTTTGCGGATCTTTCGAAAGGGTCGGATCACGCCATGGCCAAGTTCTCCGGCTACATGCAGTTGGGTGACACGTATTCGATGATCGGGCAGCTTCATCGATCCATTAAGTGTTACGTGTCGGGTTTGGAGACCCAAATGTTGACTCTGGGAAAGTCCGACCCGAGAGTTGCAGAGACGTGCAGGTACTTAGCTGAGGCACATGTTCAAGCTATGCAATTTGATGAAGCTGAGAACTACTGCAGGAAGGCTCTTGATATTCACAAGGACCATAGCACCCCAGCTTCCCTTCCAGAAGCAACCGATCGGCGCCTTATGGCCCTCATATGTGAGGCAAAGGGAGATTATGAATCAGCACTTGAGCATCTTGTCCTAGCCAGCATGTCAATGATTGCTAATGAGCAAGACAGTGAGGTTGCAGCCATTGATGTAAGCATTGGTGATATTTACTTGTCACTCTGTCGTTTTGATGAGGCCATCTTTGCTTACCAGAAAGCACTCACTGTGTTCAAATCCACAAGGACTGAAAATCACAGTTCTGTGGCATTGGTGTACATTCGCCTTGCCGAACTTTACTACAAGACAGGAAAACTACGAGAGTCAAAATCATACTGTGAAAATGCCTTAAGAATATACGCAAAACCGGCGCCCGGAACTACCCACGAAGAGATTGCCAGTGGGTTAACTGAAATCTCTGCCATCTACGAATCTCTGAATGAACCTGAGGAGGCCCTGAAGCTCTTGCAGAAAGCAATGAAGTTATTGGAGGATAACCCGGCACAGTATAGGACAATTGCAGGCATAGAAGCACAAATGGCAGTGATATTCTACATGGTTGGGAGGTACATGGAGGCTCGGAACTCTTTCGAGAGTGCCATCAGTAAGCTGAGGGCTAGTGGGGAGAGGAAATCTGCCTTTTTTGGAGTTTTATTGAACCAGATGGGTCTGTCTTGTGTTCAACTGTACAAAATTGGGGAGGCTGCCAAACTTTTTGAAGAAGCAAGAGTGATATTCGAACAGGAGTGTGGAACATATCATTTGGACACTCTAGGAGTGTATAGCAATCTTGCAGCAACTTATGATGCCTTGGGGAGGGTTGAAGATGCCATTGAGATATTGGAGCACATACTGAAGATGAGAGAAGAGAAGCTTGGAACAGCGAATCCAGATGTCGATGATGAAAAGAAAAGACTATATGAGCTTTTAAAAGAAGTGGGAAGAGTTCGAAATAAGAAGGGGAAATCACTCGAAAATCTTATAGATTCCAGCTTCctaaagatgaagaaggaaggaaggaaaagATTGGCTGCATTTGGGTGGGAGACACCAGTAGACGAGGGCGAACGTCACTACTCTACAAGAGGAACCTCAACAACAACGCCCATATTTGGCTCCACTTCGTGA 1797 0.4847 MPSLVALETPPKTPPFGASVTEYSNGGEHRTPSPSPLVKRASRKTPEKLTADESSLDNPDLGPFLLKLARDTIASGENPNKALDHAIRASKSFERCSGPGLELSMCLHVVAAIYSSLGRFGEAIHELERSIEFADLSKGSDHAMAKFSGYMQLGDTYSMIGQLHRSIKCYVSGLETQMLTLGKSDPRVAETCRYLAEAHVQAMQFDEAENYCRKALDIHKDHSTPASLPEATDRRLMALICEAKGDYESALEHLVLASMSMIANEQDSEVAAIDVSIGDIYLSLCRFDEAIFAYQKALTVFKSTRTENHSSVALVYIRLAELYYKTGKLRESKSYCENALRIYAKPAPGTTHEEIASGLTEISAIYESLNEPEEALKLLQKAMKLLEDNPAQYRTIAGIEAQMAVIFYMVGRYMEARNSFESAISKLRASGERKSAFFGVLLNQMGLSCVQLYKIGEAAKLFEEARVIFEQECGTYHLDTLGVYSNLAATYDALGRVEDAIEILEHILKMREEKLGTANPDVDDEKKRLYELLKEVGRVRNKKGKSLENLIDSSFLKMKKEGRKRLAAFGWETPVDEGERHYSTRGTSTTTPIFGSTS 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0923 598 Gene3D Tetratricopeptide repeat domain 258 439 IPR011990 GO:0005515
Sto1g0923 598 MobiDBLite consensus disorder prediction 584 598 - -
Sto1g0923 598 ProSiteProfiles TPR repeat profile. 356 389 IPR019734 GO:0005515
Sto1g0923 598 Gene3D Tetratricopeptide repeat domain 51 257 IPR011990 GO:0005515
Sto1g0923 598 ProSiteProfiles TPR repeat profile. 481 514 IPR019734 GO:0005515
Sto1g0923 598 Pfam MalT-like TPR region 112 259 IPR041617 -
Sto1g0923 598 MobiDBLite consensus disorder prediction 1 56 - -
Sto1g0923 598 SUPERFAMILY TPR-like 105 517 IPR011990 GO:0005515
Sto1g0923 598 MobiDBLite consensus disorder prediction 577 598 - -
Sto1g0923 598 PANTHER KINESIN LIGHT CHAIN-LIKE PROTEIN 35 571 - -
Sto1g0923 598 Coils Coil 369 389 - -
Sto1g0923 598 SMART tpr_5 189 222 IPR019734 GO:0005515
Sto1g0923 598 SMART tpr_5 356 389 IPR019734 GO:0005515
Sto1g0923 598 SMART tpr_5 271 304 IPR019734 GO:0005515
Sto1g0923 598 SMART tpr_5 104 137 IPR019734 GO:0005515
Sto1g0923 598 SMART tpr_5 481 514 IPR019734 GO:0005515
Sto1g0923 598 SMART tpr_5 147 180 IPR019734 GO:0005515
Sto1g0923 598 SMART tpr_5 397 430 IPR019734 GO:0005515
Sto1g0923 598 SMART tpr_5 313 346 IPR019734 GO:0005515
Sto1g0923 598 SMART tpr_5 439 472 IPR019734 GO:0005515
Sto1g0923 598 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 35 571 - -
Sto1g0923 598 Gene3D Tetratricopeptide repeat domain 440 561 IPR011990 GO:0005515
Sto1g0923 598 ProSiteProfiles TPR repeat profile. 271 304 IPR019734 GO:0005515
Sto1g0923 598 Pfam Tetratricopeptide repeat 277 299 IPR019734 GO:0005515
Sto1g0923 598 Pfam Tetratricopeptide repeat 312 387 - -
Sto1g0923 598 Pfam Tetratricopeptide repeat 441 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0923 Sto-Chr1 11327180 11354374 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0923 - - gmx:100794697 845.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0923 1 11327180 11354374 Sto1g0923 1 11327180 11354374 ECH