Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0744 ATGTCGCGAGTTGTGTGGGGGTCCCACAAGAAATCTGCAAAACATTCtagctacatatatatatcagagATGGCAATGGTGAATGCTTCAAGCCACATAGCATCAAGAACTAGTAGCCATGTGAGTTATGGAGTGATGAGTGTTTCATCATGTGAGTGTAAAGTGAGTCCAGTTGGAGTTAGGTTCCTAAAGCAGACAAATAGTCACAATGGGCTAAGAATTTTTAACCCAGTGGATGAATTGGTTGATAGAGCCATTGTGAAAGCTAGTAGGACCAAGGGTCCTCAAGCCAAGGATGTGAGGCCTTCTTCAGGTGAGATAGTGTGTGGCATGAATTTGATCTTTGTGGGAACAGAGATTGGTCCATGGAGCAAAACTGGTGGGCTTGGAGATGTTCTTGGAGGTCTTCCTCCTGCAATGGCtGCTAATGGGCATCGAGTCATGACTATTGCTCCGCGTTATGATCAGTACAAAGATGCATGGGATACAAGTGTCACAGTTGAGGCAGCTTTGGAAGCACCAAGAGTTTTGAATCTTAACAGCAACCCTTATTTTTCTGGACCATATGGCGAAGATGTCGTTTTCATCGCCAACGATTGGCACACTGCACTTCTCCCTTGCTACTTAAAATCTATGTACCAACCATTTGGCCTCTATAAGAATGCCAAAGTTGCTTTCTGTATCCACAACATTGCTTACCAAGGAAGATTCGCATTCGCCGACTTTTCGCTTCTCAATCTCCCTAATAAATTTAGAAGTTCATTTGACTTCATTGATGGGCATGTTAAACCAGTGATAGGGAGGAAGATAAATTGGATGAAAGCTGGAATTTTAGAATCACACATGGTGTTAACTGTAAGTCCATATTACGCCGAAGAACTCGTTTCCGGTGTCGACAAAGGAGTGGAGTTGGACACAATCCTTCGCAAAACCAGTGTTTTGGGAATTGTGAATGGCATGGATGTTCAGGAGTGGAATCCATCTGCTGATAAGTACATAAGCTTCAAATACGATGCTTCAACTGTATTGTCAGTAAAACCTCTTTTGAAAGAAGCTCTCCAAGCGGAAGTCGGATTGCCGGTAGACGCAAGCATTCCTCTTATTGCTTTCATCGGTAGACTTGAAGAGCAAAAAGGTTCAGACATTCTTGCAGAAGCCATTCCTGAATTCATAGAAGAGAATGTTCAAATAGTAGCCCTTGGAACTGGTAAGAAAAGAATGGAAAAACAGCTTGAGCAACTGGAGACATTATACCCTGACAAGGCTAGAGGAGTCGCGAAATTCAATGTTCCCTTAGCGCATATGATCATAGCCGGTGCCGATTACATATTGGTTCCGAGCCGATTTGAGCCTTGTGGACTCATACAGTTACAAGCCATGCGCTATGGGACGGTACCTATTGTTGCCTCAACTGGTGGATTAGTAGACACAGTCAAAGAAGGTTTCACAGGATTTCAGATGGGTGCCTTCAATGTTGAAtgTGAAGCTGTGGATCCAGCAGATGTAACTGCTCTGGCTAGCAATGTCAAAAGGGCTCTTGGGGTTCATGGAACTCCAGCTTTTGCAGAAATGATCAAGAATTGCATGGCTCAAGATCTCTCATGGAAGaGACCTGCAAAGAAGTGGGAGAATGCATTGCTAAGCTTGGGCGTTGCTGGAAGTGAAGCTGGGATTGATGGTGAAGAAATTGCTCCACAAGCAAAGGAAAATGTGCCAACTCCCTAA 1725 0.4342 MSRVVWGSHKKSAKHSSYIYISEMAMVNASSHIASRTSSHVSYGVMSVSSCECKVSPVGVRFLKQTNSHNGLRIFNPVDELVDRAIVKASRTKGPQAKDVRPSSGEIVCGMNLIFVGTEIGPWSKTGGLGDVLGGLPPAMAANGHRVMTIAPRYDQYKDAWDTSVTVEAALEAPRVLNLNSNPYFSGPYGEDVVFIANDWHTALLPCYLKSMYQPFGLYKNAKVAFCIHNIAYQGRFAFADFSLLNLPNKFRSSFDFIDGHVKPVIGRKINWMKAGILESHMVLTVSPYYAEELVSGVDKGVELDTILRKTSVLGIVNGMDVQEWNPSADKYISFKYDASTVLSVKPLLKEALQAEVGLPVDASIPLIAFIGRLEEQKGSDILAEAIPEFIEENVQIVALGTGKKRMEKQLEQLETLYPDKARGVAKFNVPLAHMIIAGADYILVPSRFEPCGLIQLQAMRYGTVPIVASTGGLVDTVKEGFTGFQMGAFNVECEAVDPADVTALASNVKRALGVHGTPAFAEMIKNCMAQDLSWKRPAKKWENALLSLGVAGSEAGIDGEEIAPQAKENVPTP 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0744 574 Gene3D Glycogen Phosphorylase B; 321 531 - -
Sto1g0744 574 TIGRFAM glgA: glycogen/starch synthase, ADP-glucose type 192 546 IPR011835 GO:0004373
Sto1g0744 574 CDD GT5_Glycogen_synthase_DULL1-like 112 544 - -
Sto1g0744 574 Pfam Starch synthase catalytic domain 168 310 IPR013534 -
Sto1g0744 574 Pfam Starch synthase catalytic domain 113 162 IPR013534 -
Sto1g0744 574 Gene3D Glycogen Phosphorylase B; 96 166 - -
Sto1g0744 574 Gene3D Glycogen Phosphorylase B; 167 544 - -
Sto1g0744 574 PANTHER GRANULE-BOUND STARCH SYNTHASE 24 168 - -
Sto1g0744 574 PANTHER GRANULE-BOUND STARCH SYNTHASE 165 574 - -
Sto1g0744 574 Hamap Glycogen synthase [glgA]. 111 549 IPR011835 GO:0004373
Sto1g0744 574 PANTHER GRANULE-BOUND STARCH SYNTHASE 1, CHLOROPLASTIC/AMYLOPLASTIC 24 168 - -
Sto1g0744 574 PANTHER GRANULE-BOUND STARCH SYNTHASE 1, CHLOROPLASTIC/AMYLOPLASTIC 165 574 - -
Sto1g0744 574 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 109 544 - -
Sto1g0744 574 Pfam Glycosyl transferases group 1 366 487 IPR001296 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0744 Sto-Chr1 7526933 7534612 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0744 164 574 Glycosyltransferase AT1G32900 74.453 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0744 K13679 - pvy:116117207 706.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0744 1 7526933 7534612 Sto1g0744 1 7526933 7534612 ECH