Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0730 aTGTCTTTCTCTGCGGCCAAAATGGCGCATCCTCTTTCTCTCAATTCCACTACTGTCAGATCCAATGATAAGCCTAACCCTATGTGTTTCGACCCCTTCAGGAGGTCTAGCTCCTCTTTCCTTGGATCCACACTCAAGCTTCGCTTCAATGCTCTCACTAAGATTTCTCCGCCAAATACCCACCGTCCGCCCGCTGTTGTTGCTGTTTCCGATGTTGTCAAGGAAAAGAAGCCCAAATCAAGCGCCAATTTGcttattacaAAAGAGGAAGGGCTAGAGCTATATGAAGACATGATCTTAGGCAGGGCTTTTGAAGATATGTGTGCCCAGATGTATTATAGAGGTAAAATGTTTGGTTTTGTCCACTTGTATAATGGCCAAGAAGCTGTGTCAACTGGATTTATCAAGCTTCTGAAGAAAGATGATTATGTGGTAAGCACCTATCGGGACCATGTTCATGCACTGAGTAAGGGAGTCCCAGCTCGTGCTGTGATGAGTGAGCTCTTTGGAAAGGCCACTGGATGCTGCCGAGGCCAAGGTGGTTCAATGCATATGTTCTCAAAAGAGCACAATGTGCTCGGAGGTTTTGCATTTATTGGTGAAGGGATCCCAGTAGCCACAGGAGCTGCATTTTCCAGCAAGTATAGAAGGGAGGTACTGAAAGAGGCAGATGTGGATAATGTCACATTGGCATTTTTTGGAGATGGAACTTGTAATAATGGGCAATTCTTTGAATGCCTAAACATGGCAGCTTTGTGGAAATTGCCAATTGTGTTTGTTGTGGAAAACAATTTGTGGGCTATTGGAATGTCACATCTCAGGGCAACTTCAGATCCTCAGATATGGAAGAAGGGGCCCGCATTTGGAATGCCAGGGGTTCATGTAGATGGAATGGATGTTTTGAAGGTCAGAGAGGTGGCAAAAGAGGCGATTGAAAGAGCTAGAAGAGGAGAGGGACCAACTTTAGTGGAATGCGAGACCTATAGATTCAGAGGACATTCATTGGCTGATCCTGATGAGCTTCGTGACCCTGCTGAGAAGGCACACTATGCTGGTAGGGATCCCATCTCTGCATTGAAGAAATACATGGCTGAGAACAAGTTAGCCAGTGAAGAGGAGTTGAAGGCCATAGAGAAGAAGATTGAAGAGGTGGTTGAAGACTCGGTTGAGTTTGCCGATGAGAGTCCGGTGCCACCTCGCAGTCAGCTTCTGGAGAATGTGTTTGCCGATCCCAAAGGTTTTGGAATTGGACCAGATGGAAGTTATAGATGTGAGGATCCAAAATTCACTGAAGGCACTGCTCAGGTTTAG 1311 0.4577 MSFSAAKMAHPLSLNSTTVRSNDKPNPMCFDPFRRSSSSFLGSTLKLRFNALTKISPPNTHRPPAVVAVSDVVKEKKPKSSANLLITKEEGLELYEDMILGRAFEDMCAQMYYRGKMFGFVHLYNGQEAVSTGFIKLLKKDDYVVSTYRDHVHALSKGVPARAVMSELFGKATGCCRGQGGSMHMFSKEHNVLGGFAFIGEGIPVATGAAFSSKYRREVLKEADVDNVTLAFFGDGTCNNGQFFECLNMAALWKLPIVFVVENNLWAIGMSHLRATSDPQIWKKGPAFGMPGVHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPDELRDPAEKAHYAGRDPISALKKYMAENKLASEEELKAIEKKIEEVVEDSVEFADESPVPPRSQLLENVFADPKGFGIGPDGSYRCEDPKFTEGTAQV 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0730 436 Gene3D - 60 417 - -
Sto1g0730 436 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 81 411 IPR029061 -
Sto1g0730 436 Coils Coil 367 387 - -
Sto1g0730 436 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT SUBUNIT ALPHA 4 436 - -
Sto1g0730 436 CDD TPP_E1_PDC_ADC_BCADC 94 392 - -
Sto1g0730 436 PANTHER PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR 4 436 - -
Sto1g0730 436 TIGRFAM PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 88 409 IPR017597 GO:0004739|GO:0006086|GO:0043231
Sto1g0730 436 Pfam Dehydrogenase E1 component 98 398 IPR001017 GO:0016624
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0730 Sto-Chr1 7284161 7287728 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0730 11 436 Acyl Lipid Metabolism Gene Families AT1G01090 80.562 0.0 702
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0730 K00161 - qsu:112008527 728.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0730 1 7284161 7287728 Sto1g0730 1 7284161 7287728 ECH