Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0643 CTGGCCTCCTCCGTGAGCCGCGTGCCCTCTAACTTCGTCAGGCCCATCGGCGACCGTCCAAATCTCCAAGACGTCCAATCCTGCGACGCTTCTTCCATTCCTCTCATCGACCTCCGAGATCTCGATGGTCCCAGCCGCCCCGACACCGTTAGGAACCATGGAGTGGAAGAGGAAGTGGTGGAGAAGATGGTGGATGTGTCGCGGGAGTTTTTCCGGTTACCGGAGAGCGAGAGGATGAAGAATTACTCCGACGACCCGTCGAAGACGACGAGGCTGTCCACTAGTTTCAATGTGAAGACGGAGAAAGTTTCCAACTGGAGAGACTTCTTGAGACTTCACTGTCATCCTCTCGAGGACTTTGTTCATGAATGGCCTTCCAACCCTCCGTCTTTCAGgGAAGAGGTGGGAGAATACTGCAGAAAGATGAGAGGATTGTCAATGAGATTAGTGGAGGCGATATCGGAAAGCTTGGGATTAGAGAGGGATTACATAAACAAAGCACTGGGGCAGCACGGGCAGCACATGGCCATCAATTACTACCCGCCGTGTCCGGAGCCAGAGCTGACGTACGGGCTGCCCGGACACGCTGACCCAAACGTGATTACCATCTTGCTGCAAGACCGCGTCCCTGGATTGCAGGTCCTCAAGGACGCCAAGTGGCTCGCCGTTAATCCCATTCCCAACACCTTCACCGTTAATATTGGCGACCAAattcagGTGATAAGCAACAATAGGTACAAGAGTGTGTTGCATCGTGCAGTAGTTAACTGCGAAAAGGAAAGGATGTCCATTCCAACATTCTATTGCCCATCACCCGACGCTCTGATTGGTCCAGCTCCGCAACTTATCGTACACCCTCATCATCCGCCGCTGTACCGGAACTTTCCCTACAGTGAATACTATGAGAAATTCTGGAATAGAGGACTCTCCAAGGAAACCTGTGTTGACATGTTCAAGCTTTCCtctcaataa 972 0.5154 LASSVSRVPSNFVRPIGDRPNLQDVQSCDASSIPLIDLRDLDGPSRPDTVRNHGVEEEVVEKMVDVSREFFRLPESERMKNYSDDPSKTTRLSTSFNVKTEKVSNWRDFLRLHCHPLEDFVHEWPSNPPSFREEVGEYCRKMRGLSMRLVEAISESLGLERDYINKALGQHGQHMAINYYPPCPEPELTYGLPGHADPNVITILLQDRVPGLQVLKDAKWLAVNPIPNTFTVNIGDQIQVISNNRYKSVLHRAVVNCEKERMSIPTFYCPSPDALIGPAPQLIVHPHHPPLYRNFPYSEYYEKFWNRGLSKETCVDMFKLSSQ 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0643 323 SUPERFAMILY Clavaminate synthase-like 3 308 - -
Sto1g0643 323 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 171 270 IPR005123 -
Sto1g0643 323 Pfam non-haem dioxygenase in morphine synthesis N-terminal 50 126 IPR026992 -
Sto1g0643 323 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 3 314 - -
Sto1g0643 323 PANTHER PROTEIN DMR6-LIKE OXYGENASE 2-LIKE 3 314 - -
Sto1g0643 323 Gene3D - 1 309 IPR027443 -
Sto1g0643 323 Pfam 2OG-Fe(II) oxygenase superfamily 173 270 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0643 Sto-Chr1 6307053 6311779 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0643 1 320 Glycosyltransferase AT5G59530 30.612 2.94e-44 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0643 K24028 - gmx:100788012 514.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0643 1 6307053 6311779 Sto1g0643 1 6307053 6311779 ECH