Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0553 ATGATTGGAAGAGACAAGAGCAGAGCCTTTTGGAGGGTCTTAAAGATTGACAAATTGGAGACAGCTGAACTAAATATCACTGAGGATTCTATGATATACTCAGAAATTGAGTGTTGTGATCTTCTTAGACGGATACATGAAGGAAACAAGTCAACAGGGGGACTTAAATTTCTCACAAATTGTTATGGAATCATTGGATTCATCAAATTCCTTGAGCCATATTACTTATTGGTCATAACAAAACGAAGGAAGGTTGGCACAATTTGTGGGCATGCAATTTATGCTATCACAAAGAGCGAAATGTTTCCAGTACCACATCCTACGGTTCGATCCAAAATGGCATATTCTAAGGATGAGAACAGATACAAGAAGCTTCTATGCAGTGTGGATCTTACGAAGGACTTCTTTTTCAGCTACTCTTACCATGTCATGCGTAGTCTTCAAAAGAATTTATCTGATAATAATACACCAGGACAGAAACTTTATGAAACAATGTTTGTTTGGAATGAGTTCTTAACTCGTGGAATCAGGAATAACCTCCAAAATACTTCCTGGACAGTTGCTTTAGTGCATGGCTTTTTTAAACAGGTGAAACACTCTATATCTGGGAGGGAGTTCTACTTAACTATCATTGCTAGACGCTCACAGCATTATGCTGGCACCAGATATCTGAAACGAGGAGTGAATGAAAAGGGTCGAGTGGCTAATGACGTTGAGACAGAGCAAATAGTCTTTGAAGAAGCTCAAGATGGATCCCCAATGCAAATAAGCTCTGTGGTACAGATGCGGGGTTCAATTCCTCTTTTCTGGTCTCAGGAAGCCTCCCCGTTGAATTTGAAACCTGACATTATATTATCAAAGAAGGATCGGAACTTTGAGGCCACAAGACTTCATTTTGAAAACCTTGTCAAGAGATATGGAAACCCCATCATAATATTGAACTTGATTAAGaCACGTGAGAAGAAGCCTCGAGAAACCATTCTCCGAGCTGAGTTTGCAAATGCTGTCAGGTCCATTAATAAAACAATGAGAGGAGAAAATCGCCTCAGGTTCCTTCACTGGGATCTGAATCGGCACTCAAGATGCAGCAAAACTCCTAATGTGTTGACACAACTGGGAAAAGTTGCTGCATATGCTTTAAAGTTGACTGGCATCTTCTGCTGTCAAGTGACACCAAATACAAGGCTAGAGGGGTTGTTACAAAATTCCTACTCTGAGAATAATGTCAGTGATCCCTATGTGTCTCAGGGAGCTTGTATTAATGAGGACACGCTTAACGAGGAAACCAAAATTAACGAATGTTATCTCAATGGTGATGTGATTGGAGATTACATTGTCAAACCCTGGATGTTTCAAGCTGGGGTCCTGAGGACTAATTGCATAGACTGTTTAGATCGTACTAATGTTGCCCAATATGCTTATGGATTAATGGCACTCGGACGTCAGCTACAAGCATTAAAATATTTGGATTCTCCATATATTGATCTTGATAACCCTTTGGCAAAGGAATTAATGGCCATTTATGAGTCAATGGGTGACACGTTAGCATTTCAGTATGGGGGTTCTGCAGCACACAATAAGATATTTTCTGAGAAAAGAGGTCAATGGAAGGCAGCAACTCAATCCCAAGAATTTTTCAGAAGTATACAGCGCTATTACAATAACACATATTTGGATGGTGATAAACAAAATTCAATTAACTTATTTTTGGGGCATTTTCAGCCACAACCAGGAAAACCTGCGCTGTGGGAGCTAGATTCAGATCAGCATTACAATGTTGCAAAACATAGTCCATTTTCAGCTGATGACAATATTAGGTCAACTTTCAAAAGATCTCTATCAGAtggaaatattaattttgaaaatgacACAGCAATTGGGAAAATGGATGATAGACTTAGTCAGCATTTCTCAGAAAAAGCTGATAGCGAATGTCTCTCGGAGTCTGCTCCTGATATCTTTACTTGTGGAAGTGATATTTTTCAATGCAGGCAGAAGGATAGGGGAATCCTCGAGGGCCAATGTTTTGAAAGTGATCATATTTGTTATGATGAACATGGAGATTCCTGTGACTGCTCAAATTTCCTTGACGTCGACTGGCTTTCTTCTTCTGGAACTTCTTGTGAGGAGGAATTGCTTGAAAGGTAG 2148 0.3939 MIGRDKSRAFWRVLKIDKLETAELNITEDSMIYSEIECCDLLRRIHEGNKSTGGLKFLTNCYGIIGFIKFLEPYYLLVITKRRKVGTICGHAIYAITKSEMFPVPHPTVRSKMAYSKDENRYKKLLCSVDLTKDFFFSYSYHVMRSLQKNLSDNNTPGQKLYETMFVWNEFLTRGIRNNLQNTSWTVALVHGFFKQVKHSISGREFYLTIIARRSQHYAGTRYLKRGVNEKGRVANDVETEQIVFEEAQDGSPMQISSVVQMRGSIPLFWSQEASPLNLKPDIILSKKDRNFEATRLHFENLVKRYGNPIIILNLIKTREKKPRETILRAEFANAVRSINKTMRGENRLRFLHWDLNRHSRCSKTPNVLTQLGKVAAYALKLTGIFCCQVTPNTRLEGLLQNSYSENNVSDPYVSQGACINEDTLNEETKINECYLNGDVIGDYIVKPWMFQAGVLRTNCIDCLDRTNVAQYAYGLMALGRQLQALKYLDSPYIDLDNPLAKELMAIYESMGDTLAFQYGGSAAHNKIFSEKRGQWKAATQSQEFFRSIQRYYNNTYLDGDKQNSINLFLGHFQPQPGKPALWELDSDQHYNVAKHSPFSADDNIRSTFKRSLSDGNINFENDTAIGKMDDRLSQHFSEKADSECLSESAPDIFTCGSDIFQCRQKDRGILEGQCFESDHICYDEHGDSCDCSNFLDVDWLSSSGTSCEEELLER 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0553 715 PANTHER PHOSPHOINOSITIDE PHOSPHATASE SAC4 1 715 - -
Sto1g0553 715 ProSiteProfiles Sac phosphatase domain profile. 126 521 IPR002013 GO:0016791
Sto1g0553 715 Pfam SacI homology domain 62 360 IPR002013 GO:0016791
Sto1g0553 715 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 1 715 IPR043573 GO:0043813|GO:0046856
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0553 Sto-Chr1 5232207 5238490 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0553 1 715 Acyl Lipid Metabolism Gene Families AT5G20840 57.240 0.0 806
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0553 K22913 - gmx:100796788 1142.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0553 1 5232207 5238490 Sto1g0553 1 5232207 5238490 ECH