Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0550 ATGAGCAGATTTGGGGATTCATTCGACGGTGTTTTGACTGAGGCAGTGAACCACCTGTTCAATTTCCCAGAAACAATGGAGAAATTCATGTTTCAACCTGGAGGTCACCACCACACTACTCGAGAAACCAGAGACGTGTCCAGCAACATCCCCGTGGACATTTTGGAAACTCCCAAGGAATATTTATTTTACATGGACATCCCTGGTCTCTCCAAATCTGACATTCAGGTGACCGTGGAAGATAAGAACACACTAGTGGTTCGAAGCAACGGGAAGAGGAAGCGCGAGGACGGTGAAGACGAAGGCTGCAAGTACCTGAGGCTGGAGAGGAGGGTTCCTCAGAAGCTGTTGAGGAAGTTCCGATTGCCTGAGAATGCAAATGCATCAGCCATCACTGCCAAATGTGAGAATGGGGTTCTGACTGTGGTTGTTGAGAAGCATCCTCCACCACCAAAATCCAAGACAGTTGAAGTCGCCATTGCCTAA 486 0.4835 MSRFGDSFDGVLTEAVNHLFNFPETMEKFMFQPGGHHHTTRETRDVSSNIPVDILETPKEYLFYMDIPGLSKSDIQVTVEDKNTLVVRSNGKRKREDGEDEGCKYLRLERRVPQKLLRKFRLPENANASAITAKCENGVLTVVVEKHPPPPKSKTVEVAIA 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0550 161 PANTHER 17.4 KDA CLASS III HEAT SHOCK PROTEIN 13 161 - -
Sto1g0550 161 Pfam Hsp20/alpha crystallin family 53 158 IPR002068 -
Sto1g0550 161 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 13 161 - -
Sto1g0550 161 CDD ACD_sHsps-like 53 146 - -
Sto1g0550 161 Gene3D - 6 160 IPR008978 -
Sto1g0550 161 SUPERFAMILY HSP20-like chaperones 19 154 IPR008978 -
Sto1g0550 161 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 43 161 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0550 Sto-Chr1 5205125 5207854 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0550 K13993 - gmx:100803161 246.128
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0550 1 5205125 5207854 Sto1g0550 1 5205125 5207854 ECH