Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0531 ATGGACGTTGTGGAAATGGAGGAGGCTTCTTCGAGCTATGCCGACGTAGAAGACCTCACTGTCAGAGAGCAGTTTCGCAGATACAGGAGGAGACAGTCAACTTCAAGCAGTTCAATCCAACAAGAAAACATAACTTCTACAAAAGCAGGGCTCTTGTTGTACGATGGCCAAAGCATTCACAGCCCCACTAATGCCGCACTTCTTCTTGAAAACATTAAACAAGAGGTTGAGAGTCTTGATGCTGATTATTCAGAAGTTACACCTGAAAAGCCACAATATTCTTCAAGAAAGAGGTTACCTGTTGATACTCATGGAGTCCCTGATGTGGGTGCTGGCTTTGACTCTATACGCCACTCACTGAAGGCTTGTAAGCAAGAGGGTGACATATTGGGAGATGGTGCAGAAACAATCTTTACTCTTTTTGCATCTCTGCTTGATTCTTCTCTTCAAGGACTGATGTCTATTCCAGATCTGATACTAAGGTTTGAGACAGAATGCCGCAATGTTTCAGAATCCATCAGGTATGGTTTAAGCGTTAGGCATCGAGTTGTGGAGGACAAATTGATGAGGCAGAAGGCTCAGCTCTTACTTGATGAGGCTGCTACCTGGTCTCTCCTGTGGTACCTTTATGGGAAAGGAAATATATCTCTAACCTTAGATATCTGGACTGAAGAACTGCCTAATAAGATAATACTGGTTCCAGGAACCTCTCATTTGGCAGCTTGTGAATTTGTTGCTGAGGACCATACGGCTCAATTATGCCTCCGGATAGTCCATTGGCTAGAAGGTTTAGCTTCTAAAGCACTTGACTTGGAAGGCAAGGTGCGTGGATCACATGTTGGTACTTATCTCCCAAGTTCTGGAGTTTGGCATCATACTCAACGTTGCCTAAAGAAAGGAACTTCTGATATTAACATGGTTCATCACTTGGATTTTGATGCTCCAACTCGTGAAAATGCAAATCTTTTGCCTGTTGACAAAAAACAAGATGAATCTCTTTTAGAAGATGTGTGGACTCTTTTGAGGGCTGGAAGACTGGAAGAGGCATGTGAACTTTGCCGATCTGCTGGACAGCTATGGAGAGCTGCTACTTTATGCCCATTTGGAGGATTAAACCAATGCCCTTCTGTTGAAGCTCTGGTCAAGAATGGTAGAAATAGAACTCTTCAAGCTGTTGAATTTGAAAGTGGCATGAGTCATCAATGGCATCTTTGGAAATGGGCTTCATATTGTGCATCAGAGAAAATAGCAGAGCTAGGTGGAAAGTATGAAGCAGCTGTATATGCAGCCCAATGTAGCAACCTAAAGCGGATGCTTCCACTTTGCACAGACTGGGAGACAGCATGCTGGGCAATGGCAAAGTCTTGGCTAGATGTTCAGGTGGACTTGGAAGTCACTCGCTTGCTTCCAAGGGGAGCAGATCAGCTTAAAAACTTTGGAGATGTAGTTGAAGGAAGTCCTGGATGTGTAGATGGTTCCTTTGAACGTTTGGATGGACCTGATAATTGGCCATTTCAAGTTTTGAATCAGCAACCACGACATATTTCATCCCTTCTTCAGAAACTTCATTCAGGGGAAATGGTCCAGGAAACTGTTACTCGACAATGCAAGGAGCAACAGCATCAAATTCAGATGACTCTAATGGTAGGGGACATACCACACCTACTAGACCTTATATGGTCGTGGATAGCACCTTCAGAAGATGATCAAAATGTATTTGGGTCTTGTGGAGATCCTCAAATGATTCGATTTGGTGCACATCTAGTGCTTGCTCTGAGATATCTAATTGCCGATGAAGCAAAGGATACCTTCAAAGACAAAATTCTGACTGTTGGTGACCTCATTCTGCATATGTATGCAATGTTTCTCTTCTCAAAGCAACATGAGGAGTTGGTGGGCATATATGCTTCTCAGCTTGCACGTCACCGATGTATTGACCTCTTTGTGCACATGATGGAACTAAGGCTGAATAGCAGCGTGCATGTCAAATACAAGATATTCCATTCTGCTATAGAGTATTTACCTTTTTCTCCTGCGGATGATTCCAAGGGTAGTTTTGTAGAAATTATTGACAGAATTTTGCTGAGATCGCGAGAAATAAAGGTTGGCAAATATGACGAACTATCAGATGTTGCAGAACAGCACAGGCTACAGAGTCTTAAAAAAGCGAAGGTCATCCAGTGGCTTTGCTTTACACCACCATCCACTATTTCAAATGTTAAAGATGTTAGTAAAAACCTTCTTCTTCGAGCAATGGTACATAGCAATACACTCTTCAGGGAGTTTGCTCTAATTTTTATGTGGAGGATCCCAGCAATGCCCATAGGTGCCCATACAGTACTTAGTTTTCTTGCTGAACCCTTGAAACAGCTTTCAGAAACTCTTGATGCTTCAGTTGATTATAATGTTTCTGAGGATCTCAGAGAGTTCCAAGACTGGAGTGAGTATTACTCTTGTGATGCAACCTATCGCAATTGGCTGAAAATTGAATTAGAGAATGCTGAAGTTCCTGTCCCTGAAATCTCACTTGAGGAAAAAGAAAGGGCCATTTTAAAAGCCGAAGAAATGCTGAAAGCATCTATTTCACTTCTAGAAAGAAAAGAAACATcttggttgacttttgttgatgATCATATTAGTGAGTTAGCTGAACCTGTTTTTCTTGAACTTAATGCCACTGCGATGCTCTGCCTGCCATCTGGAGAGTGTCTGTGTCCTAACGCCACGATATGCACTACACTGATGAGTGCCCTCTACTCTACAGCAGATGATGAAGTTGTCTTGAGTCGACTGCTAACAGTAAATGTCTCTATATCGTCAAGAGATAACTATTGCATTGAGGTTGTTCTTCGTTGCTTAGCTGTAGCTGGGGATGGACTTGGGAGACATGAACTTAATGATGGTGGTATTCTTGGCAACATTATGGCTGCTGGTTTCAAAGGTGAGCTTCCTCGGTTCCAAGCAGGAGTTACAATGGAGATATCCCGATTGGATGCTTGGTATTCCAAAAAAGATGGCTCTTTAGAGTGTCCAGCAACATACATTGTGAGGGGTCTTTGTCGTAGGTGCTGTCTCCCGGAGCTCATTCTTCGCTGCATGCAAGTTTCAGTTTCTCTTGCCGAATCAGGTTTCCTGCCAGATTGCCATGATAGATTGATTGAGCTGATTGGAAGCTCAGAAACCCACTTTATTCACTTGTTTAGTCAACAACAATTGCAGGCAAGATTGAATCTCATTCTCACGCAACCTGAAATACATACTCCCTCATGTAGACTTAGAATAACTGAATCCATGAGCTACCTACAAGGccactaa 3315 0.4235 MDVVEMEEASSSYADVEDLTVREQFRRYRRRQSTSSSSIQQENITSTKAGLLLYDGQSIHSPTNAALLLENIKQEVESLDADYSEVTPEKPQYSSRKRLPVDTHGVPDVGAGFDSIRHSLKACKQEGDILGDGAETIFTLFASLLDSSLQGLMSIPDLILRFETECRNVSESIRYGLSVRHRVVEDKLMRQKAQLLLDEAATWSLLWYLYGKGNISLTLDIWTEELPNKIILVPGTSHLAACEFVAEDHTAQLCLRIVHWLEGLASKALDLEGKVRGSHVGTYLPSSGVWHHTQRCLKKGTSDINMVHHLDFDAPTRENANLLPVDKKQDESLLEDVWTLLRAGRLEEACELCRSAGQLWRAATLCPFGGLNQCPSVEALVKNGRNRTLQAVEFESGMSHQWHLWKWASYCASEKIAELGGKYEAAVYAAQCSNLKRMLPLCTDWETACWAMAKSWLDVQVDLEVTRLLPRGADQLKNFGDVVEGSPGCVDGSFERLDGPDNWPFQVLNQQPRHISSLLQKLHSGEMVQETVTRQCKEQQHQIQMTLMVGDIPHLLDLIWSWIAPSEDDQNVFGSCGDPQMIRFGAHLVLALRYLIADEAKDTFKDKILTVGDLILHMYAMFLFSKQHEELVGIYASQLARHRCIDLFVHMMELRLNSSVHVKYKIFHSAIEYLPFSPADDSKGSFVEIIDRILLRSREIKVGKYDELSDVAEQHRLQSLKKAKVIQWLCFTPPSTISNVKDVSKNLLLRAMVHSNTLFREFALIFMWRIPAMPIGAHTVLSFLAEPLKQLSETLDASVDYNVSEDLREFQDWSEYYSCDATYRNWLKIELENAEVPVPEISLEEKERAILKAEEMLKASISLLERKETSWLTFVDDHISELAEPVFLELNATAMLCLPSGECLCPNATICTTLMSALYSTADDEVVLSRLLTVNVSISSRDNYCIEVVLRCLAVAGDGLGRHELNDGGILGNIMAAGFKGELPRFQAGVTMEISRLDAWYSKKDGSLECPATYIVRGLCRRCCLPELILRCMQVSVSLAESGFLPDCHDRLIELIGSSETHFIHLFSQQQLQARLNLILTQPEIHTPSCRLRITESMSYLQGH 1104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0531 1104 MobiDBLite consensus disorder prediction 80 101 - -
Sto1g0531 1104 Pfam Nuclear pore protein 84 / 107 196 878 IPR007252 GO:0005643|GO:0017056
Sto1g0531 1104 Gene3D - 290 439 - -
Sto1g0531 1104 PANTHER NUCLEAR PORE COMPLEX PROTEIN 8 1075 - -
Sto1g0531 1104 PANTHER NUP107-RELATED 8 1075 IPR007252 GO:0005643|GO:0017056
Sto1g0531 1104 Gene3D - 711 901 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0531 Sto-Chr1 4969687 4985368 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0531 K14301 - gmx:100786552 1698.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0531 1 4969687 4985368 Sto1g0531 1 4969687 4985368 ECH