Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0517 ATGTCTTGGGCAGGTCCGGAGGATATCTACCTTTCTACATCACTCGCCAGTTATCTTGATAAGAAACTTCTTGTATTGCTGAGAGATGGTAGAAAGCTACTGGGGATACTACGGTCTTTTGATCAATTTGCTAATGCCGTTCTTGAAAGTGCCTGTGAGAGGGTTATTGTCGGTGATCTGTATTGCGACATCCCTTTGGGACTATATATAATCCGTGGGGAGAATGTTGTTTTAATTGGTGAGCTGGACTTGGAAAGAGAGGAACTTCCCCCAAGTATGACACGTGTTTCAGAAGCAGAAATTAGAAGGGCACAGAAAGCAGAAAGGGAGGCTACAGATCTGAAAGGAACCATGAGGAAAAGAATGGAGTTCCTGGACTTGGACTAA 387 0.4393 MSWAGPEDIYLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLESACERVIVGDLYCDIPLGLYIIRGENVVLIGELDLEREELPPSMTRVSEAEIRRAQKAEREATDLKGTMRKRMEFLDLD 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0517 128 CDD LSm1 12 82 IPR034104 GO:0000956
Sto1g0517 128 PANTHER U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM1 1 127 - -
Sto1g0517 128 PANTHER LSM1 1 127 IPR044642 -
Sto1g0517 128 Pfam LSM domain 14 80 IPR001163 -
Sto1g0517 128 Gene3D - 12 125 - -
Sto1g0517 128 SMART Sm3 13 81 IPR001163 -
Sto1g0517 128 SUPERFAMILY Sm-like ribonucleoproteins 13 83 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0517 Sto-Chr1 4836593 4838930 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0517 K12620 - jre:109001967 230.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0517 1 4836593 4838930 Sto1g0517 1 4836593 4838930 ECH