Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0493 ATGGCTTCTGAGTCACCGAGTTCCGTTCGTAAAGTGGTTGTTCATCTGAGAGCTACTGGTGATGCTCCTATACTCAAGCAAGCAAAATTCAAGATACCTGGGACCGATAAATTTGCCAAAGTGATAGATTTTCTTCGCCGGCAACTACACAGGGAGACATTGTTTGTATACGTCAATAGTGCTTTCTCTCCTAACCCTGATGAAGCAGTCATTGATTTGTATAATaatattgcgTCTTTAATTTGTGTTTGTCTTGTTGCTTTCTTGGTTATACAGAATTTTGGTATTGATGGCAAACTGGTGGTCAACTACGCTTGTTCCATGGCATGGGGCTAA 336 0.4018 MASESPSSVRKVVVHLRATGDAPILKQAKFKIPGTDKFAKVIDFLRRQLHRETLFVYVNSAFSPNPDEAVIDLYNNIASLICVCLVAFLVIQNFGIDGKLVVNYACSMAWG 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0493 111 PANTHER AUTOPHAGY PROTEIN 12 1 78 IPR007242 GO:0000045|GO:0005737
Sto1g0493 111 PANTHER AUTOPHAGY PROTEIN 12 91 111 IPR007242 GO:0000045|GO:0005737
Sto1g0493 111 SUPERFAMILY Ubiquitin-like 10 110 IPR029071 -
Sto1g0493 111 Pfam Ubiquitin-like autophagy protein Apg12 11 78 IPR007242 GO:0000045|GO:0005737
Sto1g0493 111 Gene3D - 5 111 - -
Sto1g0493 111 CDD Ubl_ATG12 11 110 - -
Sto1g0493 111 PANTHER UBIQUITIN-LIKE PROTEIN ATG12B 1 78 - -
Sto1g0493 111 PANTHER UBIQUITIN-LIKE PROTEIN ATG12B 91 111 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0493 K08336 - tcc:18596213 174.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0493 1 4483214 4486349 Sto1g0493 1 4483214 4486349 ECH