Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0461 ATGAGCACTTCCTATCAACACAGTGATGACATGAGTGGTCTATATGAGGCATCATCTATAGGCTGTGTTGATACTTTGAACCAACTCTTACACCAAAACCCACAAATCTTGCACAAAATTTCACTAACTTCATTCACTGAAACTCCCTTACACATATCATCTTTGTTTGGCCATCTTGATTTCACAAAGGCCCTTCTTTCTCATAAACCCCAACTTGCCCTTGAGTTGGACTCTTCTAGAAGCACACCTCTTCACTTGGCCTCAGCAGAAGGTCACATCCAAATTGTGAAGGAATTAGTGAAAGTGAAAGCCAATAGGGAAGCATGCTTGTTTCCTAATGAAGAAGGCAGAATTCCTTTGCACTACGCAGCCATGAGAGGAAGAGTAGAGATTGCAAAAGAGTTAATTAGAGCAAAGGCTGAATCTTTGAGTTTGCATGACAATAATGGAAATAATGTCTTGCATTTTTGTGTTATGTACAACCATTTGGAAACACTCAAAGCCTTAGTGGAATTGGAGCCTCAAAGAAGTGGAGAGATTCTCAACAATAGAACCTTTGATGGGAAGAACACCATTCTCCATCTAGCTGTCATGTTCAAGCAACTTGAgACCGTAAGATACCTCCTTTCGATGTCCAAAATAAGAGCAGCAGCAAGAGAGACGGGTTTTACGCTGCATGAAACATTGGATCGAAGTCCAAAAGACATGAAGAGCCTTCAAATACAAGTCACGTTGATGAAATATGGCATCAAACCTGAAAGCAAAGAAATTGATGAGACTCAACCTCCTCAGACGACGACAAGTGATAATATTTGTAATAGCATTCTCAAGCGaataggaaattgctataaaattcaAGACAAGGACGAATGGTTGAAAGAGATGAGAGGTAATTTGAGTCTTGTGGCCATTATGATGTCAACCATAAGTTTCCAAGCCGTAGTTAATCCACCCGTTGGCCTCACTGATCAGTTACAACTTTCGTCGTCATCGTCGTCATCGTCGTCTTCACTATATTCGACTCATCATCGCCAAAAGAACCCATTTCTCTTCAGCAATACCATGTCTTTCGTTTCATCACTTAGTGTGGCCCTCTTGCTTGTGAGTGGATTTTCCCTCAAGAATAAAGTTGTGATGTGGGTGATATCATTGGGCATGTGTGTGGCTCTCACATTCCTTGCAATAGCATACCTTTATGCCACCTCATTGAATTATGGTTATGATTCGAATTGGGTTATGCTTGTATTTCTTGCATGGATTGGATTGCTTCTTATTATTACAATGTTGAACACAAtacgtttttttatttggattgtgAAGATTAGTGTCAGAGCAGTGAAGCTGGTTGTGAGACAAGTGAAGAACCAAAATGGATGTTGTTgctttgtataa 1392 0.3901 MSTSYQHSDDMSGLYEASSIGCVDTLNQLLHQNPQILHKISLTSFTETPLHISSLFGHLDFTKALLSHKPQLALELDSSRSTPLHLASAEGHIQIVKELVKVKANREACLFPNEEGRIPLHYAAMRGRVEIAKELIRAKAESLSLHDNNGNNVLHFCVMYNHLETLKALVELEPQRSGEILNNRTFDGKNTILHLAVMFKQLETVRYLLSMSKIRAAARETGFTLHETLDRSPKDMKSLQIQVTLMKYGIKPESKEIDETQPPQTTTSDNICNSILKRIGNCYKIQDKDEWLKEMRGNLSLVAIMMSTISFQAVVNPPVGLTDQLQLSSSSSSSSSSLYSTHHRQKNPFLFSNTMSFVSSLSVALLLVSGFSLKNKVVMWVISLGMCVALTFLAIAYLYATSLNYGYDSNWVMLVFLAWIGLLLIITMLNTIRFFIWIVKISVRAVKLVVRQVKNQNGCCCFV 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0461 463 Pfam Domain of unknown function 290 402 IPR026961 -
Sto1g0461 463 SUPERFAMILY Ankyrin repeat 4 211 IPR036770 -
Sto1g0461 463 ProSiteProfiles Ankyrin repeat profile. 79 105 IPR002110 GO:0005515
Sto1g0461 463 ProSiteProfiles Ankyrin repeat region circular profile. 115 141 - -
Sto1g0461 463 ProSiteProfiles Ankyrin repeat region circular profile. 79 105 - -
Sto1g0461 463 Gene3D - 2 262 IPR036770 -
Sto1g0461 463 PANTHER ANKYRIN REPEAT-CONTAINING PROTEIN ITN1-LIKE 16 432 - -
Sto1g0461 463 Pfam Ankyrin repeats (3 copies) 113 171 IPR002110 GO:0005515
Sto1g0461 463 Pfam Ankyrin repeats (3 copies) 14 101 IPR002110 GO:0005515
Sto1g0461 463 SMART ANK_2a 149 182 IPR002110 GO:0005515
Sto1g0461 463 SMART ANK_2a 45 74 IPR002110 GO:0005515
Sto1g0461 463 SMART ANK_2a 188 217 IPR002110 GO:0005515
Sto1g0461 463 SMART ANK_2a 9 38 IPR002110 GO:0005515
Sto1g0461 463 SMART ANK_2a 115 145 IPR002110 GO:0005515
Sto1g0461 463 SMART ANK_2a 79 108 IPR002110 GO:0005515
Sto1g0461 463 ProSiteProfiles Ankyrin repeat profile. 115 147 IPR002110 GO:0005515
Sto1g0461 463 PANTHER HOMEOBOX PROTEIN WARIAI 16 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0461 Sto-Chr1 4099365 4101405 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0461 17 339 Miscellaneous Gene Families AT4G10720 28.487 1.43e-30 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0461 - - zju:107435714 323.168