Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0453 ATGATGAGCTCTTCTCATCAAGAAGCTCCTCATGAAATGAGGGTTCTATACGAGGCATCATATAGAGGAAGTGTATCAACTTTGAATGATCTCATCCACCAAAACCCACTAATCTTGTACAAGATTTCCAAAACTACCTCATTTGAAACTCCTTTACACATATCAACATCTCTTGGACACCTTGATTTCACAAAGGCCCTTCTCACCAACAATCCCAAACTCGCCCTTGAGTTAGACGCATCTCGAAGCACTCCCTTGCACGTTGCTTCTGCGGAGGGCCACATCGAAATTGTGGTGGAATTGTTGAAGCTATATAACCAAGTGTGCTTGTTTATTGATGATGAGGGTAGAATTCCCTTACACTACGCAGCCATGAGAGGCAGAATCGAGGTTGCGAGAGAATTGACCAAAGCAAAGCCTgaatctctttcttttcttgacAATGGAAAGACTGTTTTCCACTTGTGTGTAAGGTACAATCATTTGGAGACTCTGAAAGCCTTTGTGGAACTTGAGATTGAGATTACTGGGCAGCTTCTCAACTTCACAACCTCTGATGATGATGGCAATACCATTCTCCATTTAGCTATCTTGTTGAAGCAAGTTgagAGCATAAGGTACCTCCTCTCTTTCTCTGAAATGAGAGAAGCAGGCAGCATGAAGAACCACATGGGTTTTACAGCCCATGAAATCATGGAGCGCAGTCCAAAAGACTTCAAAATCCTTGAAATACAATTGATGCTGATGAACGCAGGCATCACCAAAACTGATCAAAAGCAAGGAAGGGATGACATTCTTCATCATCCACACCCACCAGCTGTGCCATCATCAAGGAAACGTAATTGTTGTATAAGGATTTTCAAGTGTATCGGAAATTGGTTTAAACATAAGGATAATTGGTTAGAAGAGATGAGGGGGAATTTGAGTCTAGTGGCCACGGTGATATCAACCATATCCTTTCAAGCTATTATTAGTCCACCGGGTGGCTTCATTCAACAAGGTTTATCATCTAATTCAGACACTACTAGTACTAATAATAACCCCCTCAATTGCTCAATCATTGACAATGACCAATATTGTCCCGGGGAAGCAATCTCATCTTACAATCTCCGACCTCAATTTGTCCGATACCTAAAATGCAATACAGTTTCTTTTGTTTCATCACTTAGCGTGGCTCTTTTGCTCGTGAGTGGAGTTTCTGTGAAGAATAAACCCGTCATCTGGTTGTTATCCATGGGCATGTGTGTCTCCCTCACATCCCTAGCACTTGCCTATTTTTTTGCGGTCGATATGATAATCCCAACACATCTTGAGGATGAATTTTTATACAATTTGTTTGGACCATCATTTTTAGCCTGGATTGCATTGCTTTTGTTCATAACAGTGTTTATCACACTTCGCTTTTTCATTTGGTTAGTGAAGACTTGCGTCAGGACAATCAGGCGCTTCATCTCATTCTCAAGAGGACCAAGGAACCAAAATGGATGTTGTTGTATATGA 1500 0.4073 MMSSSHQEAPHEMRVLYEASYRGSVSTLNDLIHQNPLILYKISKTTSFETPLHISTSLGHLDFTKALLTNNPKLALELDASRSTPLHVASAEGHIEIVVELLKLYNQVCLFIDDEGRIPLHYAAMRGRIEVARELTKAKPESLSFLDNGKTVFHLCVRYNHLETLKAFVELEIEITGQLLNFTTSDDDGNTILHLAILLKQVESIRYLLSFSEMREAGSMKNHMGFTAHEIMERSPKDFKILEIQLMLMNAGITKTDQKQGRDDILHHPHPPAVPSSRKRNCCIRIFKCIGNWFKHKDNWLEEMRGNLSLVATVISTISFQAIISPPGGFIQQGLSSNSDTTSTNNNPLNCSIIDNDQYCPGEAISSYNLRPQFVRYLKCNTVSFVSSLSVALLLVSGVSVKNKPVIWLLSMGMCVSLTSLALAYFFAVDMIIPTHLEDEFLYNLFGPSFLAWIALLLFITVFITLRFFIWLVKTCVRTIRRFISFSRGPRNQNGCCCI 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0453 499 ProSiteProfiles Ankyrin repeat profile. 115 135 IPR002110 GO:0005515
Sto1g0453 499 PANTHER ANKYRIN REPEAT-CONTAINING PROTEIN ITN1-LIKE 14 389 - -
Sto1g0453 499 Pfam Domain of unknown function 299 428 IPR026961 -
Sto1g0453 499 ProSiteProfiles Ankyrin repeat profile. 81 102 IPR002110 GO:0005515
Sto1g0453 499 SUPERFAMILY Ankyrin repeat 11 228 IPR036770 -
Sto1g0453 499 ProSiteProfiles Ankyrin repeat region circular profile. 81 102 - -
Sto1g0453 499 SMART ANK_2a 81 110 IPR002110 GO:0005515
Sto1g0453 499 SMART ANK_2a 188 217 IPR002110 GO:0005515
Sto1g0453 499 SMART ANK_2a 11 40 IPR002110 GO:0005515
Sto1g0453 499 SMART ANK_2a 115 145 IPR002110 GO:0005515
Sto1g0453 499 SMART ANK_2a 148 177 IPR002110 GO:0005515
Sto1g0453 499 SMART ANK_2a 47 76 IPR002110 GO:0005515
Sto1g0453 499 Gene3D - 1 245 IPR036770 -
Sto1g0453 499 PANTHER HOMEOBOX PROTEIN WARIAI 14 389 - -
Sto1g0453 499 Pfam Ankyrin repeats (3 copies) 17 103 IPR002110 GO:0005515
Sto1g0453 499 Pfam Ankyrin repeats (3 copies) 115 176 IPR002110 GO:0005515
Sto1g0453 499 ProSiteProfiles Ankyrin repeat region circular profile. 115 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0453 Sto-Chr1 4034401 4037647 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0453 19 342 Miscellaneous Gene Families AT4G10720 27.139 2.23e-28 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0453 - - gmx:100796407 337.806