Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0445 ATGGCAGTGAAGGATCCATCAAGCCCACATGGGCTTCGCCTAGTGATAGAGGACTACCCATTTGCCGTAGACGGGCTCGAGGCCTGGTGGAAAGAGCTCGTCGAAGTGGGCCACGCAGACCACAAAGACAAGTCCTGGTGGCCCAAGATGCAAACTCGTCAAGACCTCATACAAACCTGCACAATAATCATATGGACCTCGTCAGCCCTCCACGCGGCCGTCAACTTCGGGCATAGGAGATTGCTTCCGGAGGAAGGGACTAAAGAGTATGAAGAGATGAAGACGAACCCTGAAAGGGCATTACTGAAGACTATAACGCCAAAGCTTCAAACTTTGATTGATCTCTCGGTGATAGAGATATTGTCAAGGCATGCTTCGGATGAGGTGTACCTTGGGACGAGGGATAACCCTAATTGGACAAGTGATGAGAAGCCATTGGAGGCTTTTAAGAGGTTTGGGAAGACGTTGGAAGAGATAGAGGTGAAGTTGGTAAAGAGGAATGAAGAAGGGAGTTTGAGGAATAGGATTGGGCCTGTCAATATGCCCTACACTTTGCTTTACCCTACGAGCGAGGAAGGTCTCACCGCAAGAGGGATTCCTAATAGTATCTCTATTTAA 618 0.4887 MAVKDPSSPHGLRLVIEDYPFAVDGLEAWWKELVEVGHADHKDKSWWPKMQTRQDLIQTCTIIIWTSSALHAAVNFGHRRLLPEEGTKEYEEMKTNPERALLKTITPKLQTLIDLSVIEILSRHASDEVYLGTRDNPNWTSDEKPLEAFKRFGKTLEEIEVKLVKRNEEGSLRNRIGPVNMPYTLLYPTSEEGLTARGIPNSISI 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0445 205 PANTHER SEED LINOLEATE 9S-LIPOXYGENASE 1 29 - -
Sto1g0445 205 PANTHER SEED LINOLEATE 9S-LIPOXYGENASE 26 205 - -
Sto1g0445 205 PANTHER LIPOXYGENASE 26 205 IPR000907 GO:0016702|GO:0046872
Sto1g0445 205 PANTHER LIPOXYGENASE 1 29 IPR000907 GO:0016702|GO:0046872
Sto1g0445 205 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 1 205 IPR013819 GO:0016702|GO:0046872
Sto1g0445 205 Gene3D - 25 204 - -
Sto1g0445 205 SUPERFAMILY Lipoxigenase 1 205 IPR036226 -
Sto1g0445 205 Pfam Lipoxygenase 26 188 IPR013819 GO:0016702|GO:0046872
Sto1g0445 205 Pfam Lipoxygenase 1 29 IPR013819 GO:0016702|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0445 Sto-Chr1 3899640 3900389 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0445 1 205 Acyl Lipid Metabolism Gene Families AT3G22400 52.362 5.32e-85 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0445 K15718 - gmx:547869 303.523