Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0443 ATGGCTGGAGTGTATAAGATCAAAGGGACTTTGGTGATGATGAATCCTAACCTCAAAGGACTTCTTCCATCTGCCTCTCTTGATCTTTTCCAATTCTTCACTATTAAGTTGATCAATGCTTCTTCCAATCCTATCCCTGCTGAAAATGGGTTTAGGAAAGTTGAGTATGATGAGGAGTGTGGCAATAATAGTTTGGATGGGTCAAATATGGCATTGAAGGAAGAGAAGAGGTTGGGTGAACCAATGTGTAAGTACGTGGTGCATTTTGATTGGAGCAATGAGATGGGAATTCCAGAAGCATTTGTGATAAGAAACCTTCATCCCAACGATGAGTTCTTCCTTGAGAGTCTCACCATTGAAGGCATTCCCAATCTTTCTTCCATCCATTTTGTTTGCAAGTCATGGGTTTATCCTGATAGCAAATATGAAACCTCTCGAGTTTTCTTCATCAACAAGAGCAGGCTTCCTGACGATCAAGGATTTGATCAATATGTTCCAAGAGACGAACGATTTGATGACATTAAGCTGCTTGAATTTGTGTCCAATTTCCCAAAATCTTTGATTAGCAATCTGAAAAGTTTTGTGAAAGCTGAATTGGTGtccaaacaagaggaagagttCGAGAGCTTTGAACAAGTTTATGATATTCTCTATGAAGATGGCTTCACATTTCCTGTGCCTCAACCAGTTCTTGATGCTTTTGCTGCTAAGTTTCCCATTCAGATAATATGGAAGGATGGAAGAGTGATGAAGAATTTGCACGAGAAATGCTTGCGGGTCTCAACCCTGCTGCAATCTCCCTCCTCCAATCTCAACCCTGAACAATATGGTGATCAAACTAGCAAGATAACCAAAGAACAGCTGCAGAGAAATTTGGATGGAATCACAGTGGACGAGGCACTAAGGAGCAAGAAACTATTCATATTGGATCACCATGACTCATTCATGCAATATTTGAGGAAGATTAATACAGAAACTTCTAGAAGAGCCTATGCAAGCAGAACAATCCTATTCTTGCAAAACAATGGGACTTTGAAGCCATTGGCTATTGAGTTGAGTTTGCCTCATCCTCAAGGAGATCAATTTGGTGCCATTAGTAAAGTCTTCTTGCCTTCAACTCAAGGTGTGGATGCTTCCctttggttcttggcaaaagcTTTTGTGCTTGTCAATGATGCTGGCCATCATCAACTTGTTAGTCACTGGCTAAATACTCATGCTGTGATTGAGCCATTTGTGATAGCAACACATAGACATCTGAGTGTGCTTCACCCAATTCATAAACTCCTTCATCCTCATTTTCGTGACACCATGTTTATCAATGCAATTGGTCGACAAAACCTAGCCAATGCAGAGGGAATTATAGAGACTACAATGTTGCCTCAACAATTTTGTATGGAGATGTCTTCTAAGATTTACAAGGATTGGAATTTCATTGACCAAGCACTTCCCAATGATCTTCTCAAGAgggGAATGGCAATTAGAGATCCAAATGCACCTCATGGGCTTAACCTTGTGATAAAGGACTACCCATATGCCGTTGATGGGCTAGACATATGGGCTGCCATTAACACATGGGTCCAAGACTATGTTTCTTGCTACTACAAAACAGATGACGACATTAAGCAAGACACTGAGCTTCGATCTTGGTGGAAAGAAGTAGTAGAAGTAGGACATGGTGACCTAAAAGATAAGCCATGGTGGCCCAAGATGCAAACTCGTGAAGAGCTTATTGAATCATGCACTATCATCATATGGACCTCTTCTGCCCTACATGCGGCCGTTAATTTTGGACAATACCCTTACGCAGGGTACATCCTAAACCGTCCCACTTTGAGCCGAAGGTTGATGCCTGAGGAAGGAAGTGAAGAATATGAAGAGCTTGTGAGGGACCCAAATCTAACTTTCTTGAAGACAATTACACCAAAGTATGAGACTTTTCTAGACCTTTCCATTATAGAAACATTGTCAAGCCATCCCTCTAGTGAAATCTATCTTGGGACAAGGGATAATCCTTATTGGACATCGGATTTGAGGGCACTGGAGGCTTTTAAGAGGTTTGGGAGGAAATTGGGAGACATAGAGCAAATGTTGATAAGGAGGAACAAGGATGCGACATTGTTGAATAGGGTTGGGCCTGTGAAGATTCCTTATACACTGCTTTATCCTACGAGTCAACCAGGACTTACAGGCAGAGGAATTCCTAACAGTGTCTCTATATGA 2223 0.4058 MAGVYKIKGTLVMMNPNLKGLLPSASLDLFQFFTIKLINASSNPIPAENGFRKVEYDEECGNNSLDGSNMALKEEKRLGEPMCKYVVHFDWSNEMGIPEAFVIRNLHPNDEFFLESLTIEGIPNLSSIHFVCKSWVYPDSKYETSRVFFINKSRLPDDQGFDQYVPRDERFDDIKLLEFVSNFPKSLISNLKSFVKAELVSKQEEEFESFEQVYDILYEDGFTFPVPQPVLDAFAAKFPIQIIWKDGRVMKNLHEKCLRVSTLLQSPSSNLNPEQYGDQTSKITKEQLQRNLDGITVDEALRSKKLFILDHHDSFMQYLRKINTETSRRAYASRTILFLQNNGTLKPLAIELSLPHPQGDQFGAISKVFLPSTQGVDASLWFLAKAFVLVNDAGHHQLVSHWLNTHAVIEPFVIATHRHLSVLHPIHKLLHPHFRDTMFINAIGRQNLANAEGIIETTMLPQQFCMEMSSKIYKDWNFIDQALPNDLLKRGMAIRDPNAPHGLNLVIKDYPYAVDGLDIWAAINTWVQDYVSCYYKTDDDIKQDTELRSWWKEVVEVGHGDLKDKPWWPKMQTREELIESCTIIIWTSSALHAAVNFGQYPYAGYILNRPTLSRRLMPEEGSEEYEELVRDPNLTFLKTITPKYETFLDLSIIETLSSHPSSEIYLGTRDNPYWTSDLRALEAFKRFGRKLGDIEQMLIRRNKDATLLNRVGPVKIPYTLLYPTSQPGLTGRGIPNSVSI 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0443 740 Gene3D - 374 739 - -
Sto1g0443 740 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 73 153 IPR036392 GO:0005515
Sto1g0443 740 ProSitePatterns Lipoxygenases iron-binding region signature 1. 396 410 IPR020833 GO:0016702|GO:0046872
Sto1g0443 740 ProSitePatterns Lipoxygenases iron-binding region signature 2. 423 433 IPR020834 GO:0016702|GO:0046872
Sto1g0443 740 SUPERFAMILY Lipoxigenase 154 740 IPR036226 -
Sto1g0443 740 PANTHER LIPOXYGENASE 153 243 IPR000907 GO:0016702|GO:0046872
Sto1g0443 740 PANTHER LIPOXYGENASE 5 158 IPR000907 GO:0016702|GO:0046872
Sto1g0443 740 PANTHER LIPOXYGENASE 266 740 IPR000907 GO:0016702|GO:0046872
Sto1g0443 740 SMART LH2_4 5 151 IPR001024 GO:0005515
Sto1g0443 740 Gene3D PLAT/LH2 domain 4 153 - -
Sto1g0443 740 PRINTS Plant lipoxygenase signature 83 99 IPR001246 GO:0016491
Sto1g0443 740 PRINTS Plant lipoxygenase signature 264 283 IPR001246 GO:0016491
Sto1g0443 740 PRINTS Plant lipoxygenase signature 331 355 IPR001246 GO:0016491
Sto1g0443 740 PRINTS Plant lipoxygenase signature 653 667 IPR001246 GO:0016491
Sto1g0443 740 ProSiteProfiles PLAT domain profile. 31 150 IPR001024 GO:0005515
Sto1g0443 740 Gene3D - 258 373 - -
Sto1g0443 740 Pfam PLAT/LH2 domain 84 149 IPR001024 GO:0005515
Sto1g0443 740 Gene3D - 175 257 IPR027433 -
Sto1g0443 740 Pfam Lipoxygenase 159 245 IPR013819 GO:0016702|GO:0046872
Sto1g0443 740 Pfam Lipoxygenase 267 723 IPR013819 GO:0016702|GO:0046872
Sto1g0443 740 PRINTS Lipoxygenase signature 378 395 IPR013819 GO:0016702|GO:0046872
Sto1g0443 740 PRINTS Lipoxygenase signature 396 413 IPR013819 GO:0016702|GO:0046872
Sto1g0443 740 PRINTS Lipoxygenase signature 416 436 IPR013819 GO:0016702|GO:0046872
Sto1g0443 740 PANTHER LINOLEATE 9S-LIPOXYGENASE 1 153 243 - -
Sto1g0443 740 PANTHER LINOLEATE 9S-LIPOXYGENASE 1 266 740 - -
Sto1g0443 740 PANTHER LINOLEATE 9S-LIPOXYGENASE 1 5 158 - -
Sto1g0443 740 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 164 740 IPR013819 GO:0016702|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0443 Sto-Chr1 3862449 3867808 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0443 151 740 Acyl Lipid Metabolism Gene Families AT1G55020 54.911 0.0 676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0443 K15718 - vvi:100252850 716.842