Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0442 ATGGCTAAGATGGTGGTCACAGGGACTGTAGTAATCATCAATCCTAACCTCAATGGAGTTGATCCATCTGCCTCTCTTGATCTTTTCCAATCCTTCTCTATCAAGTTGATCACTGTTTCTTCCAATTCTATCCCTGCTTCTGAAAATGGAATTTTGAAAGttgaggatgatgatgatgagatgtGTGATAATAATGGTTTGGAAGGGTCAATTAGgccattgcagaagttgagtgAACCAATGTGTAGCTACGTGGTGTATTTTGATTGGAGCAATGAGATGGGAATTCCAGTGGCATTTGTGATAAAGAACCTTCATCCCAATGATGAGTTCTATCTCGTCATGGGTTTACCCAGATTCCAAATATCACACCCCTCGCATTTTCTTCATCAACAAGATCCCAACACTGAGAGCAGACTTGCTGACGAACAAGGATTTGACATGTATGTTCCAAGAGATGATCGATTTGGGGACCAGAAATTGTTTGAATTTGTGTCCCATTTTCCGAAATCTTTGATGAACAGTCTGAAATCATTTGTGAAAAATGAATTGGTGTCGAAACAAAAGGAAGAGTTCGAGAGCTTTGAGGATGTTTCTAATGTTCTGTATGAAGATGGCTTCTCATTTCCTGTGCTTCAACAGATTCTTGATGCTATTGCTGCAAGGCTTCCCATTCAAGTCCCTTCTGATGGCATCCTCAAATTACTCTTTCCAATTCCTCATATCATCCAAGATAATTTGGATGGATGGAAGACAGATGAAGAATTTGCACGAGAAATGCTAGCGGGTGTGAACCCGGGTTTAATCCGACTCCTCCAAGCACTGAAGAGCAAGAGATTGTTCATATTAGATCACCATGACTCATTCATGCCATATTTGAGGAAGATTAATGAAACCACTAGAAAAGCTTATGCTACAAGAACAATTCTTTTCTTGCAAGATAATGGGACATTGAAGCCATTGGCCATTGAGTTAAGCTTGCCTCATCCCAATGGAGATCAATTTGGTGGTGTTAGTGAAGTGTACTTGCCTGCAATTGATGGTGTTGAGGCTTCCctttggttcttggcaaaagcTTATGTGATTGTGAATGACTCAGGCTATCATCAACTTGTTAGTCACtggCTAAATACTCATGCTGCAATGGAGCCATTTGTGATAGCAACACATAGACAGCTAAGTGTGCTTCACCCAATTCACAAACTGCTTCATCCTCATTTTCATGACACCATGTTTATCAATGCACTTGCTAGACAAAACCTAATAAGTGCAGATGGAATTATAGAGAATTCATTCTTGCCTGCAAAATATTCTATGGAGATGTCTTCTGTGGTTTACAAGAATTGGAATTTCCTTCACCAGGCACTTCCAACTGATCTTCTCAAAAGgggaatGGCTATTGAAGATCCAAATGCACCTCATGGGCTTAACCTTGTGATAAAGGACTACCCATATGCCGTTGATGGGCTAGACATATGGGCTGCCATTAACACATGGGTCCAAGACTACGTTTTTTGCTACTACAAAACAGATGACGACATTAAGCAAGACACTGAGCTTCAATCTTGGTGGAAAGAAGTAGTAGAAGTAGGACATGGTGACCTAAAAGATAAGCCATGGTGGCCCAAGATGCAAACTCGTGAAGAGCTTATTGAATCATGCACTATCATCATATGGACCTCTTCTGCCCTACATGCGGCCGTTAATTTTGGGCAATACCCTTATGGAGGGTACATCCTAAACCGTCCCACTTTGAGCCGAAGGTTCATCCCTAAGGAAGGAAGTGAAGAATATGAAGAGCTTGTGAGGGACCCAAAAGTGGCCTTCTTGAAGACAATTACACCAAAGTATGAGACCTTTCTAGATCTTTCCATTATAGAAATATTGTCAAGCCATACTTCTGATGAAATCTACCTTGGGACAAGAGATAACCCTAAGTGGACCTCGGACGTGAAGGCGTTGGAGGCTTTTAAGAGCTTTGGGacgagattagggtttatagaacaaatcatgatagagagaaataatgatCCGACGTTGTTGAATAGGATTGGACCAGTGAAGATGCCTTATACATTGTTGTATCCTACGAGTGAAGCAGGACTTACTGGCAGAGGAATCCCTAACAGTGTCTCTATATGA 2142 0.3908 MAKMVVTGTVVIINPNLNGVDPSASLDLFQSFSIKLITVSSNSIPASENGILKVEDDDDEMCDNNGLEGSIRPLQKLSEPMCSYVVYFDWSNEMGIPVAFVIKNLHPNDEFYLVMGLPRFQISHPSHFLHQQDPNTESRLADEQGFDMYVPRDDRFGDQKLFEFVSHFPKSLMNSLKSFVKNELVSKQKEEFESFEDVSNVLYEDGFSFPVLQQILDAIAARLPIQVPSDGILKLLFPIPHIIQDNLDGWKTDEEFAREMLAGVNPGLIRLLQALKSKRLFILDHHDSFMPYLRKINETTRKAYATRTILFLQDNGTLKPLAIELSLPHPNGDQFGGVSEVYLPAIDGVEASLWFLAKAYVIVNDSGYHQLVSHWLNTHAAMEPFVIATHRQLSVLHPIHKLLHPHFHDTMFINALARQNLISADGIIENSFLPAKYSMEMSSVVYKNWNFLHQALPTDLLKRGMAIEDPNAPHGLNLVIKDYPYAVDGLDIWAAINTWVQDYVFCYYKTDDDIKQDTELQSWWKEVVEVGHGDLKDKPWWPKMQTREELIESCTIIIWTSSALHAAVNFGQYPYGGYILNRPTLSRRFIPKEGSEEYEELVRDPKVAFLKTITPKYETFLDLSIIEILSSHTSDEIYLGTRDNPKWTSDVKALEAFKSFGTRLGFIEQIMIERNNDPTLLNRIGPVKMPYTLLYPTSEAGLTGRGIPNSVSI 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0442 713 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 133 713 IPR013819 GO:0016702|GO:0046872
Sto1g0442 713 PANTHER LIPOXYGENASE 3 113 IPR000907 GO:0016702|GO:0046872
Sto1g0442 713 PANTHER LIPOXYGENASE 273 713 IPR000907 GO:0016702|GO:0046872
Sto1g0442 713 PANTHER LIPOXYGENASE 130 273 IPR000907 GO:0016702|GO:0046872
Sto1g0442 713 Gene3D PLAT/LH2 domain 5 123 - -
Sto1g0442 713 PRINTS Lipoxygenase signature 351 368 IPR013819 GO:0016702|GO:0046872
Sto1g0442 713 PRINTS Lipoxygenase signature 369 386 IPR013819 GO:0016702|GO:0046872
Sto1g0442 713 PRINTS Lipoxygenase signature 389 409 IPR013819 GO:0016702|GO:0046872
Sto1g0442 713 Pfam Lipoxygenase 130 273 IPR013819 GO:0016702|GO:0046872
Sto1g0442 713 Pfam Lipoxygenase 273 696 IPR013819 GO:0016702|GO:0046872
Sto1g0442 713 Gene3D - 249 274 - -
Sto1g0442 713 PRINTS Plant lipoxygenase signature 235 251 IPR001246 GO:0016491
Sto1g0442 713 PRINTS Plant lipoxygenase signature 626 640 IPR001246 GO:0016491
Sto1g0442 713 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 64 113 IPR036392 GO:0005515
Sto1g0442 713 Gene3D - 160 247 IPR027433 -
Sto1g0442 713 ProSitePatterns Lipoxygenases iron-binding region signature 1. 369 383 IPR020833 GO:0016702|GO:0046872
Sto1g0442 713 PANTHER LINOLEATE 9S-LIPOXYGENASE 1 273 713 - -
Sto1g0442 713 PANTHER LINOLEATE 9S-LIPOXYGENASE 1 130 273 - -
Sto1g0442 713 PANTHER LINOLEATE 9S-LIPOXYGENASE 1 3 113 - -
Sto1g0442 713 Gene3D - 275 346 - -
Sto1g0442 713 Gene3D - 347 712 - -
Sto1g0442 713 SUPERFAMILY Lipoxigenase 130 713 IPR036226 -
Sto1g0442 713 ProSitePatterns Lipoxygenases iron-binding region signature 2. 396 406 IPR020834 GO:0016702|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0442 Sto-Chr1 3846483 3854038 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0442 131 713 Acyl Lipid Metabolism Gene Families AT1G55020 56.960 0.0 725
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0442 K15718 - pop:7473289 750.74