Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0441 ATGGCGTTCAGTATCGGTGGTCGTTTGATCATCAACAAGTTGAGCAATGAAGGCAATGAAGCCAATTTCTCTCTTCGTTTGATCAGTGCTACTAAGCCCCATGATCCTTCTGGAAATGGGTTGGTGAAACTCCAGAATGGGGGGTCATTGGAAGGAAGTATTACGTCAATGCCTGCGACGACATTGGAAGAACAGTACGGATACTATGTGTATTTCCGTTGGACCAACGAGTTGGGAATTCCAGGAGCATTTCAAATATGGAATCATGGCCAAACAGAATTCTTCCTAATGACTTTGACGATTGATCCTATTCCCAATCTCACCACTGCCCCTATCTATTTTGTGTATCCCAACTATGAGAGTAGACTTCCAGCGGATCAAGCCTTCTCAGTCTACGTTCCTAGAGATGATCGATTTGGAAGCCAAAAGTTGAACGAATTTCTGCAATTTTTCCCAAAATCTCAAATCAGCTTCTTGAAACCTTTTGTTAAAACACAATTGGTGACCACTGGAGAAGAAGAGTTCAAGAGCTTTGAAAACGTGAGGGATGTGCTCTATGAGAGTggctttaaattttttgtgccTAAAGAAGTACTTGATGCTATGGCTGCAAGGTCACCCATAACTCCCCCGGAAGACGGCTATGTCCCACTCAAGTTTCCAATTCCTGGTATCATTCAAGCGAATTTGGATGGATGGATGACCGACGAACAATTCGCAAGAGAAATGTTTGCGGGTGGAAATCCGGTTGTAATTCGCCTTCTCCAAGAGTTCCCCATAAAAAGCACACTAGACCCTAATGTCTACGGCGATCATACCTGTACCATAACCAAACAACACTTGGAGAAAAACTTGAACGGACTCACAGTAGAGAAGGCAGTTGAAAGGAAGAGATTGTTCATATTGGATCACCATGACTCATTCATGCCATACATGAGGTTGATTAATAGTGAGACTCCAAGTAGGGCATATGGTAATAGGACAGTCCTTTTCTTGCAAGACAATGGGACCTTGAAGCCATTGGCTATTGAATTGAGCTTGCCTCATCCCAAAGGAGACCAATTTGGTGCTGTTAGTAAAGTGTTCTTACCTGCAACTCAAGGCGTTGAGGCTTCTCTTTGGCTATTGGCTAAGGCTTATGTCACTGTTACTGACACTGGCCTTCATCAAGTTGCTAGCCACtgGCTAAATACTCATGCTGTGATTGAGCCAATTGTGATAGCAACACATAGACATCTGAGTGTGCTTCACCCAATTCATAAACTCCTTCATCCTCATCTTCGTGACACCTTGTTTATTAATGCAATTGGTCGACAAAACCTAACCAATGCATTTGGAATCATAGAGGATACAATGTTGCCTGGCAAATTCTCTATGGAGATGTCATCAGTGATTTACAAGAGTTGGAATTTCATTGACCAAGCACTTCCCAATGATCTTCTCAAGAGGGGAATGGCAGTTAAAAATCCAAAAGCTCCTTATGGGTTAGACCTTGTGATAAAGGACTACCCTTATGCGGTTGATGGGCTAGACATATGGGATGCCATTAACACATGGGTTCGAGACTATGTGTCCTCCTACTATGACTCTGATCAACCCATTCAACAAGACACTGAGCTACAATCTTGGTGGAAAGAAGTAGTAGAAGTAGGACATGCTGACCTAAAAAATAAGCCATGGTGGCCCAAGATGCAAACTCGTGAAGAGCTTATTGAATCATGCACTATCATCATATGGACCTCTTCAGCCCTACATGCAGCCGTTAATTTTGGGCAGTACCCTTTTGGAGGGTACATCCTAAACCGTCCCACTCTGAGCCGAAGGTTCATCCCTGAGGAAGGAAGTGAAGAATATGAAGAGCTTGTGAGGGACCCAAAACAAGCTTTATTGAAAACAATTACACCAAAGTATGAGACCCTTCTAGCACTTTCCATTATAGAAATCTTGTCAAGCCATTCCTCTGATGAAATCTACCTTGGGACAAGAGATAACCCTAATTGGACCTCAGATGAGAAGGCATTGGTAGCTTTTGAGAAATTTGGGAAGAGAATGGGAGAGATAGAGCAAATATTGATAAAGAGGAACAAAGATGGGACGCTTTTGAATAGGGTTGGACCTGTTGATTTGCCTTATACTATGCTCTATCCTACAAGTGAGCCAGGAGTTACAGGCAGAGGTGTTCCTAATAGTATCTCTATATGA 2202 0.4242 MAFSIGGRLIINKLSNEGNEANFSLRLISATKPHDPSGNGLVKLQNGGSLEGSITSMPATTLEEQYGYYVYFRWTNELGIPGAFQIWNHGQTEFFLMTLTIDPIPNLTTAPIYFVYPNYESRLPADQAFSVYVPRDDRFGSQKLNEFLQFFPKSQISFLKPFVKTQLVTTGEEEFKSFENVRDVLYESGFKFFVPKEVLDAMAARSPITPPEDGYVPLKFPIPGIIQANLDGWMTDEQFAREMFAGGNPVVIRLLQEFPIKSTLDPNVYGDHTCTITKQHLEKNLNGLTVEKAVERKRLFILDHHDSFMPYMRLINSETPSRAYGNRTVLFLQDNGTLKPLAIELSLPHPKGDQFGAVSKVFLPATQGVEASLWLLAKAYVTVTDTGLHQVASHWLNTHAVIEPIVIATHRHLSVLHPIHKLLHPHLRDTLFINAIGRQNLTNAFGIIEDTMLPGKFSMEMSSVIYKSWNFIDQALPNDLLKRGMAVKNPKAPYGLDLVIKDYPYAVDGLDIWDAINTWVRDYVSSYYDSDQPIQQDTELQSWWKEVVEVGHADLKNKPWWPKMQTREELIESCTIIIWTSSALHAAVNFGQYPFGGYILNRPTLSRRFIPEEGSEEYEELVRDPKQALLKTITPKYETLLALSIIEILSSHSSDEIYLGTRDNPNWTSDEKALVAFEKFGKRMGEIEQILIKRNKDGTLLNRVGPVDLPYTMLYPTSEPGVTGRGVPNSISI 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0441 733 PRINTS Plant lipoxygenase signature 218 234 IPR001246 GO:0016491
Sto1g0441 733 PRINTS Plant lipoxygenase signature 257 276 IPR001246 GO:0016491
Sto1g0441 733 PRINTS Plant lipoxygenase signature 324 348 IPR001246 GO:0016491
Sto1g0441 733 PRINTS Plant lipoxygenase signature 646 660 IPR001246 GO:0016491
Sto1g0441 733 PRINTS Lipoxygenase signature 371 388 IPR013819 GO:0016702|GO:0046872
Sto1g0441 733 PRINTS Lipoxygenase signature 389 406 IPR013819 GO:0016702|GO:0046872
Sto1g0441 733 PRINTS Lipoxygenase signature 409 429 IPR013819 GO:0016702|GO:0046872
Sto1g0441 733 ProSitePatterns Lipoxygenases iron-binding region signature 1. 389 403 IPR020833 GO:0016702|GO:0046872
Sto1g0441 733 ProSitePatterns Lipoxygenases iron-binding region signature 2. 416 426 IPR020834 GO:0016702|GO:0046872
Sto1g0441 733 PANTHER LIPOXYGENASE 128 733 IPR000907 GO:0016702|GO:0046872
Sto1g0441 733 PANTHER LIPOXYGENASE 22 109 IPR000907 GO:0016702|GO:0046872
Sto1g0441 733 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 22 112 IPR036392 GO:0005515
Sto1g0441 733 Gene3D - 367 732 - -
Sto1g0441 733 PANTHER SEED LINOLEATE 9S-LIPOXYGENASE 22 109 - -
Sto1g0441 733 PANTHER SEED LINOLEATE 9S-LIPOXYGENASE 128 733 - -
Sto1g0441 733 Gene3D - 143 230 IPR027433 -
Sto1g0441 733 Gene3D - 231 366 - -
Sto1g0441 733 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 117 733 IPR013819 GO:0016702|GO:0046872
Sto1g0441 733 SUPERFAMILY Lipoxigenase 103 733 IPR036226 -
Sto1g0441 733 SMART LH2_4 3 126 IPR001024 GO:0005515
Sto1g0441 733 Pfam Lipoxygenase 117 716 IPR013819 GO:0016702|GO:0046872
Sto1g0441 733 Gene3D PLAT/LH2 domain 8 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0441 Sto-Chr1 3827348 3835586 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0441 117 733 Acyl Lipid Metabolism Gene Families AT1G55020 57.692 0.0 734
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0441 K15718 - zju:107412008 762.296