Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0368 ATGTATTCTGATTGTATCACTTTTACTGAATATACAGGGAACATCTCACATATTTGCTTCAGAGATTTCGATTTTACTTCAGTTTGCAGTCAAAGGGCTATAATTGACGTTGTAAATCTGCTGTTCCTGTCAGTTTTCTGTTTCTCTTTGTTCATCAGTTGGATAAGAAAAATTCCTCCAAGTGATAGTAACTGTGGAAAGGGATGGATTTTCAAAGTTGGGTCGTTGTGCTGTGCTTTTATTAGCATTACATATTTCAGTAATGGTTTGTGGAATTTCATAGCCAAAACTGGTGAGTTCCATACGTTGAACTGGTTGATTTCCATCATCAGAGGACTAATTTGGATTTCTTTAACTATTTCTTTGCTTATTCAGAGATATAAGTGGATGAAAATTTTGAACTTTATATGGTGGGTTTTTTCATGTACACTGGTTTCAGCTCTCAATATAGAAATTATgtttaaacaccaaacacttCATTACTTCTATATAGTACAATGGCCTCTACACCTTTTACTTGTCTTCTGTGCCTTCCAAAACCTTGGTTACTTTGTCTCTCAACATATCTCAGAAACCACTATATATGAACCTCTTTTGGTTCAAGAAACTGAAAGCAGTAGAACATTCCTTAGTAAACTCACTTTTTCTTGGATTAATCCATTACTCAGCTTTGGATACTTAAGGCCTCTAGCTCTTGAAGACATCCCTTCTCTTGTTCCCGAAGACGAATCTCATTCGGTTTACCAGAAGTTTACTCATGCATGGGACTTGCTTTTGAGGGAGAGGAACATGATGAGCAATACTAAAAACTTGGTTCTTTGGTCCATagtaaaaaatcatttaaaagataacttaatAATAGCAACTTTGGCATTTCTCAGGACAATCTCTCTTGTACTCTCTCCTCTAATACTCTATGCTTTTGTAAACTACACAAATCACAGTGAGCAAAACATGAAAGATGGTCTTTGCATAGTGGGGTTTCTGATTATATCCAAGCTGGTTGAGTCTTTGTCCCAGAGGCACTGGTTTTTTAATGCCAGGAGGtcaggaatgagaatgagatcaGCTCTAATGGTAGCAGTGTACAAAAAGCAGCTAAAGCTTTCGAGTTTAGCGAAAAGGAGGCATTCGACCGGGGAGATTGTGAATTACATTGCAGTTGATGCCTACAGAATGGGAGAATTTCCATGGTGGTTTCATTCAACATGGACTAGTGCATTGCAAATTCTTCTTGGTGTTGGTGTGCTTTTCAGTGTTGTAGGTCTTGGTGCACTTCCTGGTTTAGTCCCTCTTCTAATCTGTGGCCTTCTGAATGTACCATTTGCAAAAGTCCTACAAAAGTGCCAGACAGAATTCATGACTGCACAGGATGAACGCCTAAGAGCCACTTCAGAGATTCTTAATAGTATGAAAATCATAAAGTTACAATCTTGGGAGGATAAATTCAAGAACTTGGTCGAATCCCTTCGTCATAAAGAggttgagtgtttgggtgaagcACAGTTCAAGAAGGCTCATGGGACCTTTATGTATTGGATGACTCCTGCCATCATTTCATCAGTGATTTTCCTTGGATGTGCCATCTTTCAGAGTGCCCCATTAAATGCTGAGACCATCTTCACAGTTCTTGCAACCTTGAGGATCATGGCAGAGCCTGTTAGGGTGATCCCAGAGGCTCTCTCAGTCATGATTCAAGTTAAGGTCTCCTTTGACCGTCTCAACACCTTCTTGCTGGAAGATGAGATACAAAATGATGATGATCATGTTATTGGAAATGAAATTCAAAACTCAGCTAATAACAGCATAGAGATCCATGCAGGGAATTTCAGTTGGGGACAAGAATTGTTGTCCCCAACTTTAAGAGATGTGAATTTAGAAATCAAATGGAGACAGAAAGTTGCAGTTTGTGGACCAGTTGGAGCTGGAAAATCATCTCTCTTATGCACAATACTCAGAGAGATACCCAAAATTTCAGGAAGTGTTAGTGTAGGAGGAACTCTAGCCTATGTTTCTCAAACTTCCTGGATTCAAAGTGGGACAATTCGTGATAATATACTCTATGGAAAGCCAATGGACATCACCAGATATAAGAATGCCATTAGAGTTTGTGCCTTGGATAAGGATATCAATTGCTTTATCCATGGTGATCTTACAGAAATAGGTCAAAGAGGGGTTAACATGAGTGGAGGACAGAAGCAAAGGATTCAACTTGCTCGTGCAGTCTATAATGATGCTGACATCTATCTTCTTGATGACCCTTTCAGTGCAGTTGATGCACATACTGCTACTGTTCTGTTTCATGATTGTGTCATGACTGCTCTAAGAGAGAAAACGGTCATTCTAGTCACTCATCAAGTGGAGTTTCTTTCAGAAGTTGATAAAATTCTGGTAATGGAGGGAGGGAAAATAACTCAATCAGGTGGCTATGAAGATCTCTTGACTACTGGGACAGCCTTTGAACAACTAGTGAATGCTCATAGAGATGTGATAAATGGGGTTGATCAAAGTAATGAAAACCAAGTGGAGCCTGAAAAAACAGATTCAGATCAGCCAGAGGAATCTCATGGTTTTCATCCCATGAAAGATGAGAGTGAGGCTGAGATTTCTACCAAGAGACAACAACTTACACAAGAGGAGGAAAAGGAGATTGGTGATGTTGGATTGCAGCCATTTTGGGATTATATCTTTATCTCCAAGGGTTCATTGGTTCTAACTTTGATGTTATTATCACAGTTAGCTTTTGTTGCTTTGCAGGCTGCCTCAACATTTTGGCTAGCTCTAGCCATTGAAATCCCAAAAGTAACAAGTGCAATTTTGATTGGAGTTTACACAACTCTTTCATTTCTTTGTGTTGTCTCTGTATACCTAAGGGCTTTTTGTGCTGCATATCTTGGATTAAAAGCTTCTAAGGCCTTCTTCTCTTGTTTTACCAATGCTATCTTCAATGCTCCTATGTTGTTCTTCGACTCAACCCCGGTGGGGCGGATCTTGACCCGAGCTTCATCAGATTTCAGTATTCTAGACTTTGATATACCTTTCTCCATCAATTTTGTAGCAGCCGGAGGAATTGAGCTTCTGACAATGATTGGGATAATGGCTTCTGTCACATGGCAAGTCCTCATTGTAGCTATTCTAGCCATGGTGGCTTCAATATACATTCTgAGTTATTATCAATCCTCTGCAAGGGAACTAATAAGAATTAATGGAACCACAAAAGCTCCAATAATGAATTTTACAGCTGAGACATCACTTGGAGTAGTAACAGTAAGAGCTTTCAACATGGTAGACAGATTTTTCCAAAGCTACTTAAAGATTGTGGATACAGATGCAACACTCTTCTTTCATTCAAATGCTGCAATGGAATGGATAGTTCTAAGGATTGAAGGACTTCAGAATTTGACACTCTTCACTGCTGCTTTTTTGCTTGTTTTACTTCCAAAGGGACACCTTACCCCAGGGCTTGTGggactttctctctcttatgCACTGACACTTACTCAAACCCAAATTTTTCTGACCAGATGGTTTTGCAGCTTATCAAACCATATTATATCTGTTGAAAGAATCAAGCAATTCATTCACATACCAGCAGAGCCTCCTTCAATTGTGGAGACCAAGAGGCCTCCATCTTCTTGGCCTTCCAAGGGTAGGATAGATCTTCAGGCCCTAAAgATCAGATATAGTCCAAATGCTCCATTAGTCCTTAAGGGAATCACTTGCACGCTTAAACAAGGGAACAGAGTGGGAGTTGTAGGAAGGACAGGAAGTGGGAAAACGACACTTATAAGTGCTTTGTTTCGCTTAGTTGAGCCAGCAAGTGGAAATATTCTTATAGATGACCTTAACATATGCTCAATGGGGCTCAAGGACTTAAGGATGAAGCTAAGCATCATTCCTCAAGAACCTACTCTTTTCAGGGGTAGTGTTAGAACCAACTTGGATCCATTAGGCCTATACACAGATGATGAAATATGGAAGGCTTTAGAGAAATGTCAGCTTAAGGCAACAGTTAGCAATCTACCAAAACTGTTGGACTCTTCTGTGAGTGATGAAGGTGAAAATTGGAGTGTGGGACAAAGGCAACTGTTTTGTCTTGGAAGAGTTGTTCTGAAGAGGAACAAAATTCTTGTGCTGGATGAAGCTACTGCTTCCATTGATTCTGCCACAGATTCCATTCTACAGAGAGTTATAAGGCAGGAATTTGCAGAATGCACTGTCATAACTGTGGCTCACAGAGTTCCAACTGTAATAGATAGTAACATGATCATGGTCCTCTCTTATGGTGAACTGGTGGAGTATGATGAACCTTCAAAGCTTATGGAGACAAACTCTTCATTTTCTAAGCTGGTGGCTGAATATTGGTCCAGCTGCAGGAGAAACTCCTCACAAAATATTAGCAAGCAACAACATTAG 4416 0.389 MYSDCITFTEYTGNISHICFRDFDFTSVCSQRAIIDVVNLLFLSVFCFSLFISWIRKIPPSDSNCGKGWIFKVGSLCCAFISITYFSNGLWNFIAKTGEFHTLNWLISIIRGLIWISLTISLLIQRYKWMKILNFIWWVFSCTLVSALNIEIMFKHQTLHYFYIVQWPLHLLLVFCAFQNLGYFVSQHISETTIYEPLLVQETESSRTFLSKLTFSWINPLLSFGYLRPLALEDIPSLVPEDESHSVYQKFTHAWDLLLRERNMMSNTKNLVLWSIVKNHLKDNLIIATLAFLRTISLVLSPLILYAFVNYTNHSEQNMKDGLCIVGFLIISKLVESLSQRHWFFNARRSGMRMRSALMVAVYKKQLKLSSLAKRRHSTGEIVNYIAVDAYRMGEFPWWFHSTWTSALQILLGVGVLFSVVGLGALPGLVPLLICGLLNVPFAKVLQKCQTEFMTAQDERLRATSEILNSMKIIKLQSWEDKFKNLVESLRHKEVECLGEAQFKKAHGTFMYWMTPAIISSVIFLGCAIFQSAPLNAETIFTVLATLRIMAEPVRVIPEALSVMIQVKVSFDRLNTFLLEDEIQNDDDHVIGNEIQNSANNSIEIHAGNFSWGQELLSPTLRDVNLEIKWRQKVAVCGPVGAGKSSLLCTILREIPKISGSVSVGGTLAYVSQTSWIQSGTIRDNILYGKPMDITRYKNAIRVCALDKDINCFIHGDLTEIGQRGVNMSGGQKQRIQLARAVYNDADIYLLDDPFSAVDAHTATVLFHDCVMTALREKTVILVTHQVEFLSEVDKILVMEGGKITQSGGYEDLLTTGTAFEQLVNAHRDVINGVDQSNENQVEPEKTDSDQPEESHGFHPMKDESEAEISTKRQQLTQEEEKEIGDVGLQPFWDYIFISKGSLVLTLMLLSQLAFVALQAASTFWLALAIEIPKVTSAILIGVYTTLSFLCVVSVYLRAFCAAYLGLKASKAFFSCFTNAIFNAPMLFFDSTPVGRILTRASSDFSILDFDIPFSINFVAAGGIELLTMIGIMASVTWQVLIVAILAMVASIYILSYYQSSARELIRINGTTKAPIMNFTAETSLGVVTVRAFNMVDRFFQSYLKIVDTDATLFFHSNAAMEWIVLRIEGLQNLTLFTAAFLLVLLPKGHLTPGLVGLSLSYALTLTQTQIFLTRWFCSLSNHIISVERIKQFIHIPAEPPSIVETKRPPSSWPSKGRIDLQALKIRYSPNAPLVLKGITCTLKQGNRVGVVGRTGSGKTTLISALFRLVEPASGNILIDDLNICSMGLKDLRMKLSIIPQEPTLFRGSVRTNLDPLGLYTDDEIWKALEKCQLKATVSNLPKLLDSSVSDEGENWSVGQRQLFCLGRVVLKRNKILVLDEATASIDSATDSILQRVIRQEFAECTVITVAHRVPTVIDSNMIMVLSYGELVEYDEPSKLMETNSSFSKLVAEYWSSCRRNSSQNISKQQH 1471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0368 1471 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1221 1453 IPR003439 GO:0005524
Sto1g0368 1471 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 67 1462 - -
Sto1g0368 1471 Gene3D - 578 850 IPR027417 -
Sto1g0368 1471 Coils Coil 862 882 - -
Sto1g0368 1471 CDD ABCC_MRP_domain2 1217 1437 - -
Sto1g0368 1471 Gene3D ABC transporter type 1, transmembrane domain 272 577 IPR036640 GO:0005524|GO:0016021
Sto1g0368 1471 SUPERFAMILY ABC transporter transmembrane region 273 574 IPR036640 GO:0005524|GO:0016021
Sto1g0368 1471 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 598 826 IPR027417 -
Sto1g0368 1471 CDD ABC_6TM_ABCC_D1 286 574 IPR044746 GO:0140359
Sto1g0368 1471 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1210 1452 IPR027417 -
Sto1g0368 1471 Pfam ABC transporter 1236 1384 IPR003439 GO:0005524
Sto1g0368 1471 Pfam ABC transporter 621 755 IPR003439 GO:0005524
Sto1g0368 1471 Gene3D ABC transporter type 1, transmembrane domain 868 1200 IPR036640 GO:0005524|GO:0016021
Sto1g0368 1471 CDD ABC_6TM_ABCC_D2 901 1194 IPR044726 GO:0140359
Sto1g0368 1471 SMART AAA_5 630 803 IPR003593 -
Sto1g0368 1471 SMART AAA_5 1245 1437 IPR003593 -
Sto1g0368 1471 Gene3D - 1202 1453 IPR027417 -
Sto1g0368 1471 SUPERFAMILY ABC transporter transmembrane region 892 1201 IPR036640 GO:0005524|GO:0016021
Sto1g0368 1471 CDD ABCC_MRP_domain1 603 803 - -
Sto1g0368 1471 MobiDBLite consensus disorder prediction 841 876 - -
Sto1g0368 1471 PANTHER NHPM BACTERIOCIN SYSTEM ABC TRANSPORTER, PEPTIDASE/ATP-BINDING PROTEIN-RELATED 67 1462 - -
Sto1g0368 1471 MobiDBLite consensus disorder prediction 835 876 - -
Sto1g0368 1471 ProSitePatterns ABC transporters family signature. 728 742 IPR017871 GO:0005524
Sto1g0368 1471 Pfam ABC transporter transmembrane region 936 1168 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto1g0368 1471 Pfam ABC transporter transmembrane region 292 549 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto1g0368 1471 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 605 826 IPR003439 GO:0005524
Sto1g0368 1471 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 285 566 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto1g0368 1471 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 907 1182 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0368 Sto-Chr1 2971250 2979487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0368 597 817 Calmodulin-binding Proteins AT2G36910 27.234 8.76e-20 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0368 - - gmx:100784827 2041.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0368 1 2971250 2979487 Sto1g0368 1 2971250 2979487 ECH