Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0324 ATGCAAAGCTCTGACATGAGAGTCCTCAGAACAATACTCACCACCAAGCACCGCCTGCTTagccccaccaccaccaaccctAAACGCTTCTCACCTCCTTCTCTCATTTCCCTTCGCCCCTTTCCAAACCCTCTTTCTTCTCGCTATTCCCACTCCGCAAGCAGCTCTCAAGAAGATTCCAGCAATGTAAATACTCCTTCCGAGGATACGAGAAATCATACTCCCTCTTGGTCGCGCTATGGTCTTATTTCTAGAGACAACAGTGATGATTATGACGGGGAAAAGAATCGGATTGACTCTGGGGATAAAGTTGAAAACGGAAGAGTGGATGAGGGAGCGAAGGAGGCGAACACATTGATTGGGACTGAAAAgggtggtggtagtggtgggGGGATTTCAAGCAAAGCTGGGAGTAAGAAAAAGGCGAAGGGAAAGACCAATTGGGTTTGCTCAGATTGTGGGTATACGTCTGGGCAATGGTGGGGGGTTTGCCGCTCGTGTAATGCGTCTGGCACGATGAAGGTGTTTCATGAAGCGAAATCCAGTGATGGTGGTAAGGTAAGTGGGTTTTCAGTTTTGGAGAAAGCAGTGGGATCGTGGCTCTCACAGCCGGCTGGTGAAGTGCGTCCGCTGAGATTGACGGAAGTGAACCGAGGACTTAATCATCAAGAGTGGCGAATTCCTCTCTCTGGCCATTTTGGAAATGAAGTTTCTAGAGTGCTTGGAGGTGGTCTCGTGCCAGGCTCTTTGATTTTAGTTGGTGGGGACCCTGGTGTTGGGAAGAGTACACTTCTGTTGCAGATTGCTGCAATGATAGCAGAAGGGTATGATCCGCGTGGAGCAACACCAGTCATATATGTCTCTGGTGAAGAGAGTGTTGAGCAAATTGTTAACAGAGCAGATCGTCTAGGGATTAAATcagaattatatttatattcaagTACTGATATTGAGGACATATTGGAGAAAAGCCAGAATCTCTCCCCTCGAGCTCTGGTTGTTGATTCAATACAGACTGTTTATTTGAAAGGAGTAATGGGAAGTGCTGGAGGGGTTGCGCAGGTGAAGGAGTGTACTTCAGCATTGCTTCGATATGCAAAGAAGACTAATACTCCAGTCTTTTTGATTGGACATGTAACAAAATCTGGAGACATAGCAGGACCTCGTGTATTGGAGCACATTGTTGATGTTGTTTTGTATATGGAAGGGGAGAAGTACTCAGCCCATCGTATGCTTCGAGTGGTGAAAAATCGGTTTGGATCCTCCGATGAGCTCGGAGTTTTTGAGATGTCACAATCAGGTCTCCAGGCTGTTTCAAATGCCAGTGAAATATTTCTAAGTGAGCAACACCTAGATTCTGATTATTTAGCTGGGCTAGCTGTTGCTGTCATAATGGATGGTTCTCGAGCTTTCCTAATTGAAATTCAGGCACTTTGTGTTTCCGGCACAACAGTTTCAAGGCATGTTAATGGCATCCAACAAAGTAGAGCTGATATGATTATATCTGTTCTTATAAAGCAAGTTGGACTTCATCTTCAAGAAAATGCCGTGTTTCTGAATGTTGTTAGCGGATTGACTGTGTCTGAGACAGCTGGAGATCTTGCAATAGCAGCTGCAATTTGCAGCAGTTTCTTGGAGTTCCCTATTCCCAATGACATTgcattcattggtgaaattggcCTTGGTGGTGAGCTTCGCTCGGTTCCTAGAATGGATAAAAGGATAAACACAGTGGCCAAATTGGGGTACAGATCCTGCATTGTACCAAAGGCAGCTGAAAAGGCCATGGGAACTGAAGgttttggaaagatgaaaattgtaGGTTGCAGGAATCTCAAAGAGGTTATTAACACTGTTTTCACCAAACAATGA 1872 0.4284 MQSSDMRVLRTILTTKHRLLSPTTTNPKRFSPPSLISLRPFPNPLSSRYSHSASSSQEDSSNVNTPSEDTRNHTPSWSRYGLISRDNSDDYDGEKNRIDSGDKVENGRVDEGAKEANTLIGTEKGGGSGGGISSKAGSKKKAKGKTNWVCSDCGYTSGQWWGVCRSCNASGTMKVFHEAKSSDGGKVSGFSVLEKAVGSWLSQPAGEVRPLRLTEVNRGLNHQEWRIPLSGHFGNEVSRVLGGGLVPGSLILVGGDPGVGKSTLLLQIAAMIAEGYDPRGATPVIYVSGEESVEQIVNRADRLGIKSELYLYSSTDIEDILEKSQNLSPRALVVDSIQTVYLKGVMGSAGGVAQVKECTSALLRYAKKTNTPVFLIGHVTKSGDIAGPRVLEHIVDVVLYMEGEKYSAHRMLRVVKNRFGSSDELGVFEMSQSGLQAVSNASEIFLSEQHLDSDYLAGLAVAVIMDGSRAFLIEIQALCVSGTTVSRHVNGIQQSRADMIISVLIKQVGLHLQENAVFLNVVSGLTVSETAGDLAIAAAICSSFLEFPIPNDIAFIGEIGLGGELRSVPRMDKRINTVAKLGYRSCIVPKAAEKAMGTEGFGKMKIVGCRNLKEVINTVFTKQ 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0324 623 MobiDBLite consensus disorder prediction 40 83 - -
Sto1g0324 623 Gene3D - 236 436 IPR027417 -
Sto1g0324 623 MobiDBLite consensus disorder prediction 17 32 - -
Sto1g0324 623 Gene3D - 456 623 IPR014721 -
Sto1g0324 623 Pfam Rubredoxin metal binding domain 148 174 IPR041166 -
Sto1g0324 623 PANTHER DNA REPAIR-LIKE PROTEINRADA 6 622 - -
Sto1g0324 623 SUPERFAMILY Ribosomal protein S5 domain 2-like 416 620 IPR020568 -
Sto1g0324 623 MobiDBLite consensus disorder prediction 85 112 - -
Sto1g0324 623 Pfam Subunit ChlI of Mg-chelatase 500 591 - -
Sto1g0324 623 Pfam AAA domain 240 383 - -
Sto1g0324 623 ProSiteProfiles RecA family profile 1. 205 379 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Sto1g0324 623 PRINTS DNA repair protein radA signature 150 174 - -
Sto1g0324 623 PRINTS DNA repair protein radA signature 239 267 - -
Sto1g0324 623 PRINTS DNA repair protein radA signature 335 359 - -
Sto1g0324 623 PRINTS DNA repair protein radA signature 374 402 - -
Sto1g0324 623 PRINTS DNA repair protein radA signature 409 435 - -
Sto1g0324 623 PRINTS DNA repair protein radA signature 484 507 - -
Sto1g0324 623 PANTHER DNA REPAIR PROTEIN RADA 6 622 - -
Sto1g0324 623 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 237 430 IPR027417 -
Sto1g0324 623 MobiDBLite consensus disorder prediction 17 139 - -
Sto1g0324 623 SMART AAA_5 247 405 IPR003593 -
Sto1g0324 623 TIGRFAM sms: DNA repair protein RadA 142 615 IPR004504 GO:0003684|GO:0005524|GO:0006281
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0324 Sto-Chr1 2545293 2554106 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0324 K04485 - gmx:100794165 749.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0324 1 2545293 2554106 Sto1g0324 1 2545293 2554106 ECH