Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0318 ATGAAATCCCTTCTCCTCACCCTTCTCCTTGTCGCCTCCGCCGTGGCCACAAGCCACGGCACAAGCCGctcagaACCCTACTTGATCCACCCTTTGAGACTGAAATCTGGATCGGGCTCCAATGGTGCATCCCTTATTAAGGGCATAAACTGTGCAAGTTGGAGACTTGGTGTGGAAGCTCATAACATCATAGATTGGAAAACTGTGCCACAAGAATGTGAAGAGTATGTAGGGAACTACATGCTAGGGCTTCAGTATAGACAAGACTCTCAAGCTGTGACTCGTGAGGCTTATCTCTATGCTAAGTCTCTTAATCTCTCTCGTGATGGTAAAGACATTTGGGTGTTTGATATTGATGAGACCTCACTCTCTAATCTTCCCTATTATGCTAAACATGGATTTGGGGCGGTTCCATACAATGCGACGTCGTTTAATGAATGGGTGGAAGTAGGAGTGGCACCAGCACTTCCAGAGAGCAAAAAGCTGTACAAGAAATTGTTGTCTCTGGGAATCAACGTAGTATTCTTAACAGGAAGACCTCTTTCCCAGAAACATATTACTGCTTCTAACCTCAACCTCGCTGGATATCACACATGGACCAAATTAATTGTCAAGGATGTGTCGTTTACTGATAAAACGGCAGTAGAATACAAATCAGCAGAAAGGAGGAAGCTTGAGAAGAGTGGGTATAGAATCGTAGGGAATATTGGGGATCAATGGAGCGACATTTTGGGTACCAATACCGGCCACCGGACCTTCAAGTTGCCCGACCCACTCTATTACATTAGTTGA 792 0.4482 MKSLLLTLLLVASAVATSHGTSRSEPYLIHPLRLKSGSGSNGASLIKGINCASWRLGVEAHNIIDWKTVPQECEEYVGNYMLGLQYRQDSQAVTREAYLYAKSLNLSRDGKDIWVFDIDETSLSNLPYYAKHGFGAVPYNATSFNEWVEVGVAPALPESKKLYKKLLSLGINVVFLTGRPLSQKHITASNLNLAGYHTWTKLIVKDVSFTDKTAVEYKSAERRKLEKSGYRIVGNIGDQWSDILGTNTGHRTFKLPDPLYYIS 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0318 263 Pfam HAD superfamily, subfamily IIIB (Acid phosphatase) 44 262 IPR005519 -
Sto1g0318 263 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 4 263 - -
Sto1g0318 263 PIRSF VSP 1 263 IPR014403 -
Sto1g0318 263 Gene3D - 46 263 IPR023214 -
Sto1g0318 263 TIGRFAM plant-AP: plant acid phosphatase 45 262 IPR010028 GO:0003993
Sto1g0318 263 SUPERFAMILY HAD-like 98 248 IPR036412 -
Sto1g0318 263 PANTHER OS05G0192100 PROTEIN 4 263 - -
Sto1g0318 263 CDD HAD_VSP 77 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0318 Sto-Chr1 2474202 2499441 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0318 - - gmx:547669 339.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0318 1 2474202 2499441 Sto1g0318 1 2474202 2499441 ECH