Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0311 ATGGGGGGCTCTGGAGGGTTGAGGGCGTCGTCGCAGCCGTCTCAGGCGGCGGCAAAGCAATATGGGGTGACCAAGCCGATATCAATGGCTGGACCGGCGGTAGCGGATGTGCAAAGGACTTTGGAGTTAGAGAAGGTTCGATTTTGCATTTTAAAGCGTTTTCCTTCTTCCCTAGTTTTGATTCTTGATGTTGATGTATTGTGGATTTTTGTTTTTCGTTGTGCACGGAAGTTTCTAGTCTACTCTGGGCTTTATGAGAGCGCAGAGGAAGCTGCTAAGAGAGAAGATGTCCTTCAACGTCTTGGACAGTATGGAGGTGTCAGCTCTAGTCATTGCATACTGGATGTAGTGGTTGTGTTCGAGAACTTTATTGAAATAGTAAAGGGTTGGGTAAAGGAACTTACCCGGGTAAGAGGATACACTGATCAAATGGTGGAAGATGCAAATGCTGTCATATTAACTTTTGGTTCTTATCGGCTTGGGGTTCATGGTCCTGGGGCAGACATAGACACCTTATGTATTGGACCATCCTATGTAAACCGAGAGgAGGACTTTTTCTTTGTATTGCACGACATTCTAGCTAACATCAGCCAAGTCACAGAATTGCAACCAGTTCCAGATGCTCACGTCCCAGTTATGAAATTCAAATTTGATGGAATATCAATTGACCTACTCTATGCAAGTATATCTTGCTTGGTAGTGCCAGAAGCCTTGGATATATCTGATGTGTCTGTACTACACAATGTGGATGAACCTACTGTTCGAAGTCTGAATGGCTGTAGAGTTGCAGATCAAATTTTAAAGCTTGTTCCAAATGTTGAGATGACTGGATTTCTTGGTGGTGTGAACTTGGCAATTCTTGTTGCTCGAGTGTGCCAGCTGTATCCAAATGCAGTTCCTAGTATGCTTGTCTCTCGATTCTTTAGGGTTTATACACAGTGGAGGTGGCCAAATCCTGTCATGTTATGTTCAATAGAGGAAAATGAGCTTGGATTTTCTGTTTGGGATCCTCGTAAAAATCCTCGTGACCGAACACATCACATGCCAATTATTACTCCAGCCTATCCTTGCATGAATTCTAGTTACAATGTTTCAACAAGTACACGTCGTGTTATTATGGAGCAGTTTCAATATGGCAACAAGATATGTGAGGAAATAGAGCTTAATAAGGCCCATTGGAGTGCTATGTTTCAGCCATACCTTTTCTTTGAAAGctataaaaattatcttcaaGTTGACATAGTAGCTGCTGATGTTGATGACTTGCGAACTTGGAAGGGTTGGGTGGAATCACGACTTCGGCAGTTGACTTTGATGATTGAGCGTGATACTCTAGGAAAGTTGCAGTGCCATCCTTATCCACATGAATATGTGGATGTGTCAAAGCAATGTGCGCATTGTGCTTTCTTCATGGGTTTGCAGAGGAAGCAAGGGGAGATTGTTCAAGAAGGTCAGCAGTTTGATATACGTGAGACAGTTGATGAATTCCGACATGCTGTTAATATGTACATGTTCTGGAAACCGGGGATGGACATATATGTTTCACATGTTCGTAGAAGGCAAATACCATCTTATGTTTTACCAAATGGTTATAAGCGATCTCGACCGTCAAGGCCAACAGGACAACAGGAGAATTCTGTTAAATCATATCGTGCAGATGAGGTGTATGGGAGTGAACATGTCGAGGGAAACCGTAAGAGGAAAAATGATGACAGTGTGATTGAGAAGCATGACATTACACCAAAGAGACAGTCTATAAGTCCTCAGAGGCAAGATTCAGTTTCTTCGGACATTATGAATAAATCAATGGATAGCTTGGGGTGTAGTACGAGCAACTCATGCCAATTTGAAGCAAGTCAAGCTCAAGGTTTGGATTCTAATGGTTTGTCTGCTGATGCCCTGTCGAATAGTCAAGATTTGAGACATATACAGAGCATTAAATTGTCCTACAGAGGGCAAGATGATCTGGATAAAGGAATACCATCTCCTGAACATGAACCAGAATGTGCATCAAATTCTAGTGTCGTTACATCTGTTGCAAGTGACGGTGGTTCTTCTGATGATGTTGGATTTGGTTCAATGGAAGGCTGTGGTGAGGATAACAATGGGGGTATTGTCAGAGAGGGTGATGAGATGGTGTCTTCGCCGGATAATGCATATGGGCGAGATTCTGTTGCACTTTTGGAGAATGCAATTGCTAATGGAAATGGATTATCACAAGAACTATGGAACAGTCGGAGCCAAGTGATTCTTGATATTTTACTTATGTTTATTGTAGTATTGAGTGTTGTTAGGCTGTCTTGGTCTTTCAACCTTGCAAAATTGGAAGTCATGGTTATAAAGCTGAAGAAGGACTTGGAGTTGGAGGTGAAATCTACCACATCGTTTGTACAGTTCATAATTTTTCTTGCTTTTAGGGAGTATGGTAGGATACTCCATGGACATGTTGGGCATGGCGGTTTCCATAGTGTTGTTTACTGTGGTATGACTCTGCTTTtcatttttggtttttgggtggGGGGAGGGTTTGGTTTTGTGTAA 2541 0.4179 MGGSGGLRASSQPSQAAAKQYGVTKPISMAGPAVADVQRTLELEKVRFCILKRFPSSLVLILDVDVLWIFVFRCARKFLVYSGLYESAEEAAKREDVLQRLGQYGGVSSSHCILDVVVVFENFIEIVKGWVKELTRVRGYTDQMVEDANAVILTFGSYRLGVHGPGADIDTLCIGPSYVNREEDFFFVLHDILANISQVTELQPVPDAHVPVMKFKFDGISIDLLYASISCLVVPEALDISDVSVLHNVDEPTVRSLNGCRVADQILKLVPNVEMTGFLGGVNLAILVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCSIEENELGFSVWDPRKNPRDRTHHMPIITPAYPCMNSSYNVSTSTRRVIMEQFQYGNKICEEIELNKAHWSAMFQPYLFFESYKNYLQVDIVAADVDDLRTWKGWVESRLRQLTLMIERDTLGKLQCHPYPHEYVDVSKQCAHCAFFMGLQRKQGEIVQEGQQFDIRETVDEFRHAVNMYMFWKPGMDIYVSHVRRRQIPSYVLPNGYKRSRPSRPTGQQENSVKSYRADEVYGSEHVEGNRKRKNDDSVIEKHDITPKRQSISPQRQDSVSSDIMNKSMDSLGCSTSNSCQFEASQAQGLDSNGLSADALSNSQDLRHIQSIKLSYRGQDDLDKGIPSPEHEPECASNSSVVTSVASDGGSSDDVGFGSMEGCGEDNNGGIVREGDEMVSSPDNAYGRDSVALLENAIANGNGLSQELWNSRSQVILDILLMFIVVLSVVRLSWSFNLAKLEVMVIKLKKDLELEVKSTTSFVQFIIFLAFREYGRILHGHVGHGGFHSVVYCGMTLLFIFGFWVGGGFGFV 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0311 846 MobiDBLite consensus disorder prediction 535 549 - -
Sto1g0311 846 CDD NT_PAP_TUTase 148 270 - -
Sto1g0311 846 PANTHER POLY A POLYMERASE 119 601 - -
Sto1g0311 846 PANTHER POLY A POLYMERASE 12 46 - -
Sto1g0311 846 Pfam Poly(A) polymerase central domain 79 274 IPR007012 GO:0004652|GO:0043631
Sto1g0311 846 Pfam Poly(A) polymerase central domain 275 398 IPR007012 GO:0004652|GO:0043631
Sto1g0311 846 SUPERFAMILY Nucleotidyltransferase 108 269 IPR043519 -
Sto1g0311 846 Gene3D Poly(A) polymerase predicted RNA binding domain 402 517 - -
Sto1g0311 846 Gene3D - 235 399 - -
Sto1g0311 846 PANTHER NUCLEAR POLY(A) POLYMERASE 4 12 46 - -
Sto1g0311 846 PANTHER NUCLEAR POLY(A) POLYMERASE 4 119 601 - -
Sto1g0311 846 SUPERFAMILY PAP/Archaeal CCA-adding enzyme, C-terminal domain 402 527 IPR011068 GO:0003723|GO:0016779|GO:0031123
Sto1g0311 846 MobiDBLite consensus disorder prediction 527 604 - -
Sto1g0311 846 MobiDBLite consensus disorder prediction 584 604 - -
Sto1g0311 846 SUPERFAMILY PAP/OAS1 substrate-binding domain 275 399 - -
Sto1g0311 846 Pfam Poly(A) polymerase predicted RNA binding domain 402 460 IPR007010 GO:0003723|GO:0043631
Sto1g0311 846 Gene3D Beta Polymerase, domain 2 130 229 IPR043519 -
Sto1g0311 846 MobiDBLite consensus disorder prediction 553 583 - -
Sto1g0311 846 Pfam Nucleotidyltransferase domain 149 225 IPR002934 GO:0016779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0311 Sto-Chr1 2425825 2431923 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0311 K14376 - zju:107435341 904.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0311 1 2425825 2431923 Sto1g0311 1 2425825 2431923 ECH