Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0292 ATGGTGACTGAACAAAAGCCaccggaggaggaggaggaggaggaggagaaggtgGTTGTCGTGTTGGAGAATGGCAGCACAATGAGCGGTCCACTCGTCGGCGCTTGCCGGCGAAGTGACGCGATGCAGGTCGTTCTGAGGCTCCTGTGCATGCTCTGCTCTGTGATTGCGCTCTCGTTTATGGTTACGGCCAAGCAAGCTAGCTCCGTCACTATCTATGGATTTCATTTACCGGTTTACTCCAAGTGGTCCTTCTCGGAGTCCTTCGAATATCTTGTTGGGGTGTCTGCTGCTGTTGCGGCTCACTCCTTGCTGCAATTACTCATTGCCACATCCAGATTGCTAAGTAAATCATCTGTGATTCCTTCAAGAAACCACGCTTGGCTTATTTTTGCTGGTGATCAGGCATTTGCTTATGCACTGATAAGTGCTGGGTCTGCTGCATCTGGGGTGACCAATCTGAATCGCACTGGAATTAGACATCCAGCTCTGCCAAATTTTTGTAAGCCTTTGCACAAGTTTTGTGACCATATTGCCATTTCAATAGCCTTCACTTTCATCAGCTGTTTCCTGCTGGCAGCAACTGCTATCCAGGATGTTATATGGCTCTCCAAACGCTAA 621 0.4573 MVTEQKPPEEEEEEEEKVVVVLENGSTMSGPLVGACRRSDAMQVVLRLLCMLCSVIALSFMVTAKQASSVTIYGFHLPVYSKWSFSESFEYLVGVSAAVAAHSLLQLLIATSRLLSKSSVIPSRNHAWLIFAGDQAFAYALISAGSAASGVTNLNRTGIRHPALPNFCKPLHKFCDHIAISIAFTFISCFLLAATAIQDVIWLSKR 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0292 206 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 11 205 - -
Sto1g0292 206 Pfam Casparian strip membrane protein domain 39 191 IPR006702 -
Sto1g0292 206 PANTHER CASP-LIKE PROTEIN 3A2 11 205 - -
Sto1g0292 206 TIGRFAM A_tha_TIGR01569: plant integral membrane protein TIGR01569 44 199 IPR006459 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0292 Sto-Chr1 2226384 2228978 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0292 34 205 Miscellaneous Gene Families AT3G16300 51.163 2.67e-55 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0292 - - gmx:100783028 296.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0292 1 2226384 2228978 Sto1g0292 1 2226384 2228978 ECH