Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0279 ATGTCAGCCATGTTGAAGGAACAGTTGGTTAAAGTGTTCTCTTTAATGAAGCCAGGAATGTTATTTCAATACGAAGCTGAGCTTGATGCTTTCCTTGAGTTTCTTATTTGGAGATTCTCAATTTGGGTTGATAAGCCAACTCCAGGCATTGCTCTCATGAACCTGAGGTATAGAGACGAGCGTGCAATTGAACCAAGAGAAAAAGTCAGAACTGGTCTGGAGGGTCCTGGACTCACTGCTGCTCAGAAGATTTGGTATTGTGTTGCAACTGTTGGTGGTCAGTATATCTGGGCTCGCATACAATCATTCTCTGCTTTTCGTAGGTGGGGTGATTCTGAGCAGAGGTCATTGGCACGCCGAATATGGATCTTTATACAACGTATAGAAGGAATTTATAGAGCTGCTTCATTTGGCAACCTgttgatatttctttttactGGAAGATATAGAAATCTTATTGAAAGAGCTTTACAAGCTAGGCTTGTCTATGGGAGCCCAAATATGAATCGTGCTGTAAGCTTTGAGTATATGAACCGGCAGTTAGTTTGGAATGAATTCTCGGAAATGTTGTTGTTGCTTCTTCCCCTTCTTAATTCATCATCTATGAGAAATCTCCTTCGGCCATTTTCTAAGGATAAATCTTCAAGTTCAGCTGAGGATGACACTCTGTGCCCCATTTGTCGATCTACTCCAATCATTCCCTTTGTTGCTCTCCCTTGTCAGCACAGATACTGTTACTATTGTCTACGGACACGATGTGCTGCTGCTCCGTCGTTTAGATGTTCCAGGTGTAGTGAGCCAGTTGCTGCAATGCAGCGGCATAGTGGTGTCACCAATGGATGA 843 0.4235 MSAMLKEQLVKVFSLMKPGMLFQYEAELDAFLEFLIWRFSIWVDKPTPGIALMNLRYRDERAIEPREKVRTGLEGPGLTAAQKIWYCVATVGGQYIWARIQSFSAFRRWGDSEQRSLARRIWIFIQRIEGIYRAASFGNLLIFLFTGRYRNLIERALQARLVYGSPNMNRAVSFEYMNRQLVWNEFSEMLLLLLPLLNSSSMRNLLRPFSKDKSSSSAEDDTLCPICRSTPIIPFVALPCQHRYCYYCLRTRCAAAPSFRCSRCSEPVAAMQRHSGVTNG 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0279 280 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 197 278 IPR013083 -
Sto1g0279 280 SUPERFAMILY RING/U-box 217 270 - -
Sto1g0279 280 PANTHER - 1 277 - -
Sto1g0279 280 ProSitePatterns Zinc finger RING-type signature. 240 249 IPR017907 -
Sto1g0279 280 Pfam Pex2 / Pex12 amino terminal region 1 202 IPR006845 -
Sto1g0279 280 Pfam Zinc finger, C3HC4 type (RING finger) 224 264 IPR018957 GO:0046872
Sto1g0279 280 CDD RING-HC_PEX2 224 265 - -
Sto1g0279 280 ProSiteProfiles Zinc finger RING-type profile. 224 265 IPR001841 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0279 K06664 - gmx:100805856 498.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0279 1 2107823 2110618 Sto1g0279 1 2107823 2110618 ECH