Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0274 ATGGAGGCATCTTCAGATGAAAGGGGAAGAAGAAAGGGTGGTCTCATTACCATGCCCTTCATCATAgGAAATGAGGGATTTGCAAAGGTGGCAAGCACAGGGTTGTTGCCAAACATGGTGTTATATCTGATAGGAGTGTACAAGCTAAGATTAGGCAAAGCTgcaaatataatattcttgtggTATGCTGCTTCGAATTTCTCTCCACTCTTTGGTGCTTTCGTTGCTGATTCTTTTCTGGGACGCTTTCTTTCCATCGCCTTAGGTTCCATTATTACTTTCCTGGGGACGGCATTATTGTGGTTAACAGCTATGAAGCCAGAGTTAAGGCCAAGCCAATCATCAGCAACAACATCCCAGATGGCCTTCTTACTCACAAGCCTTGCCCTCATATCCATTGGAATTGGTGGCATCTCATGCTCCTTACCATTTGGTGCTGATCAGCTCAACAACAAATCTAACCCTAATAACCAAAGAGTCTTAGAGAGCTTCATTGGATGTCTCTTCACTGGATTTGCTCAGGTCATTGTTGTTGCCTACAAGAACAGAAAGCTTTCACTTCCACCTCGAAACTCAGCAGGAAATTACCATCGTAGGAAGGGCTCAGATCTTCTTGTTCCTACTAATAAACTCAGGTTTCTAAACAAAGCGTGCATCATCAAGAACCCAGAGCAGGACATAACCCCAGATGGCTCTGCCTCAAATCCATGGAATCTCTGCACAACAGATCAAGTTGAAGAATTAAAAGCCATCATCAAGGTCCTTCCACTATGGTCCACAAGCATCATGATGTCCGTGAGCACCAGCCAGACCTCATTCCGCGTTCTCCAAGCCAAGACCATGAACCGCCACATCACCCCAAACTTCCAGATCCCGCCAGGCTCCTTCAGCTCCTTCATGATGTTCTCGATCTTCGTCACCGTCGGCATCTACGACCGCATCGCCCTCCCCCTCGCCTCCCGAATCGCCCACAAACAAGTCCGAATCAGCGCCAAGACACGAATCGGGATCGGCCTCGTGTTCTGCGTCCTCGATTTCATCGCCTCGGCGTTAATCGAGAACAAGAGGCGAAAGAAGGCGATCGGAGAAGGGTTCGCCGAAAACCCTAATGGCGTGGTGGACATGTCGGCGATGTGGCTTCTGGTGCATCACGCGCTGATGGGGATGGGGGAGGCGTTCAATGCGATAGGGCAATCGGAGTTCTACTACGCGGAGTTTCCGAGGACGATGTCGAGCATTGGGTCGGCATTGTATAGTTTAGGGATGGGAGTGGGGAATTTGATGGCGTCGGTGATAGTGAATGTGGTGGATGGGGTTAGCTCGAGAGGAGGAAGAGAGAGTTGGGTGAGTGATAATTTGAACAAAGGGCGTTATGATCTGTATTTCTGGGTGCTTGCTGGGATTGAGAGTGAATTTTGTGTACTATTTAGTTTGTAG 1437 0.4795 MEASSDERGRRKGGLITMPFIIGNEGFAKVASTGLLPNMVLYLIGVYKLRLGKAANIIFLWYAASNFSPLFGAFVADSFLGRFLSIALGSIITFLGTALLWLTAMKPELRPSQSSATTSQMAFLLTSLALISIGIGGISCSLPFGADQLNNKSNPNNQRVLESFIGCLFTGFAQVIVVAYKNRKLSLPPRNSAGNYHRRKGSDLLVPTNKLRFLNKACIIKNPEQDITPDGSASNPWNLCTTDQVEELKAIIKVLPLWSTSIMMSVSTSQTSFRVLQAKTMNRHITPNFQIPPGSFSSFMMFSIFVTVGIYDRIALPLASRIAHKQVRISAKTRIGIGLVFCVLDFIASALIENKRRKKAIGEGFAENPNGVVDMSAMWLLVHHALMGMGEAFNAIGQSEFYYAEFPRTMSSIGSALYSLGMGVGNLMASVIVNVVDGVSSRGGRESWVSDNLNKGRYDLYFWVLAGIESEFCVLFSL 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0274 478 Pfam POT family 85 171 IPR000109 GO:0016020|GO:0022857|GO:0055085
Sto1g0274 478 Pfam POT family 173 449 IPR000109 GO:0016020|GO:0022857|GO:0055085
Sto1g0274 478 Gene3D MFS general substrate transporter like domains 2 165 IPR036259 -
Sto1g0274 478 Gene3D MFS general substrate transporter like domains 166 478 IPR036259 -
Sto1g0274 478 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 9 166 IPR000109 GO:0016020|GO:0022857|GO:0055085
Sto1g0274 478 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 166 468 IPR000109 GO:0016020|GO:0022857|GO:0055085
Sto1g0274 478 SUPERFAMILY MFS general substrate transporter 29 142 IPR036259 -
Sto1g0274 478 PANTHER PROTEIN NRT1/ PTR FAMILY 1.2 9 166 - -
Sto1g0274 478 PANTHER PROTEIN NRT1/ PTR FAMILY 1.2 166 468 - -
Sto1g0274 478 SUPERFAMILY MFS general substrate transporter 296 468 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0274 Sto-Chr1 2067963 2071855 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0274 2 466 Organic Solute Cotransporters AT1G52190 48.885 8.41e-180 515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0274 - K14638 pvy:116136093 528.094