Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0270 ATGCAGTCTGTGGAAGTTTGGTCTCTTCTGACGTCTGGAAAAGGTTTGTACCATTTCGCCATGCGGGGACGCCTTGTTGATCCGTACAAGCGAGTGGCATCCAGAGAACACATAAGTTCATACGGCAAAGAAGAAAATCCAGCTTCAGTACGATTACCGAGGGAAAAACCTTCTTGGCAGCGCTCTCTACGGCATGTAATAGTggcttcaatttcttcatttttatatgGCTACCATCTTGGAGTAGTCAATGAAACATTGGAGAGCATGTCCATGGAACTTGGCTTTAGGGGAAATACAATAGCTGAAGGTTTGGTAGTAAGTACGTGTCTAGGCGGTGCTTTTATTGGATCCCTGTTCAGTGGGTGGATTGCAGATGGGGTTGGCCGTAGAAGGGCATTCCAGTTGTGTGCTTTGCCTATGATTATTGGGGCATCAATGAGTGCAACAACAAATGGCCTGTGGGGTATGCTTTTGGGAAGGTTATTTGTTGGCACTGGAATGGGACTTGGCCCCCCTGTTGCAGCTCTTTATGTGGCTGAGGTTTCACCTGCAGCTGTAAGGGGTACTTTTGGTAGCATAACTCAAATTGCAACTTGTTTTGGACTTATGGGGTCACTCTTTATTGGAATCCCGGCCAAGGAAATAGTGGGTTGGTGGCGGATTTGTTTCTGGGTTTCTGCTATTCCTGCTGCAATACTTGCCTTTTTCATGGAGTTCTGTGCAGAGAGTCCTCATTGGCTTCATAAGAGAGGAAGAAGCAATGAGGCTGAAGCTGAATTTGAGAAGCTTTTGGGTGGGATACACGTGAAACATGCAATGAGTGAACTGTTAAGGTCTGACAGAGGTGATGAGACTGATATGGTGAAACTCTCAGAATTACTTTATGGTCGCCATTTCAAagTGATGTTCATTGGATCTACGCTTTTTGCTTTACAGCAGCTATCTGGAATAAATGctgttttttatttctcttcAACTGTCTTTAAAAGCTTTGGTGTACCATCAGCTCTTGCAAATACATGTGTAGGAATTTGCAATTTAGTGGGGTCAATTCTTGCAATGATTATGATGGATAAACTTGGAAGGAAAGTGCTCCTCCTGGGGAGTTTTTTGGGCATGGCGGTGTCAATGGGTCTCCAAGTTATTGCTGCTAGTTCCTTGGCATCTGGATCTGGAGCAATGTATCTATCTGTTGGTGGCATGTTGATGTTTGTCTTTACATTTTCCCTTGGTGCTGGTCCAGTACCTAGTCTCCTCATGTCAGAAATACTACCTGGCAGGATCAGGGCAAAGGCATTTGCAATTTGCTTGGCCGTGCATTGGGTGATAAACTTTTTCGTTGGTCTATTATTTTTGCGGTTGCTGGAGCAAATAGGGGCACAGCTCCTGTATACTATTTTTGGTGCATTTTGTCTGGTGGCAGTgatttttgtgaagaaaaatgTTGTGGAAACAAAAGGAAAGTCACTCCAAGAAATTGAGATAGCACTTCTTCCTCAAGAAGCAACTTAG 1515 0.4277 MQSVEVWSLLTSGKGLYHFAMRGRLVDPYKRVASREHISSYGKEENPASVRLPREKPSWQRSLRHVIVASISSFLYGYHLGVVNETLESMSMELGFRGNTIAEGLVVSTCLGGAFIGSLFSGWIADGVGRRRAFQLCALPMIIGASMSATTNGLWGMLLGRLFVGTGMGLGPPVAALYVAEVSPAAVRGTFGSITQIATCFGLMGSLFIGIPAKEIVGWWRICFWVSAIPAAILAFFMEFCAESPHWLHKRGRSNEAEAEFEKLLGGIHVKHAMSELLRSDRGDETDMVKLSELLYGRHFKVMFIGSTLFALQQLSGINAVFYFSSTVFKSFGVPSALANTCVGICNLVGSILAMIMMDKLGRKVLLLGSFLGMAVSMGLQVIAASSLASGSGAMYLSVGGMLMFVFTFSLGAGPVPSLLMSEILPGRIRAKAFAICLAVHWVINFFVGLLFLRLLEQIGAQLLYTIFGAFCLVAVIFVKKNVVETKGKSLQEIEIALLPQEAT 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0270 504 ProSitePatterns Sugar transport proteins signature 1. 354 370 IPR005829 GO:0016021|GO:0022857|GO:0055085
Sto1g0270 504 PRINTS Sugar transporter signature 73 83 IPR003663 GO:0016020|GO:0022857|GO:0055085
Sto1g0270 504 PRINTS Sugar transporter signature 158 177 IPR003663 GO:0016020|GO:0022857|GO:0055085
Sto1g0270 504 PRINTS Sugar transporter signature 313 323 IPR003663 GO:0016020|GO:0022857|GO:0055085
Sto1g0270 504 PRINTS Sugar transporter signature 399 420 IPR003663 GO:0016020|GO:0022857|GO:0055085
Sto1g0270 504 PRINTS Sugar transporter signature 422 434 IPR003663 GO:0016020|GO:0022857|GO:0055085
Sto1g0270 504 PANTHER PLASTIDIC GLUCOSE TRANSPORTER 3-RELATED 22 502 - -
Sto1g0270 504 CDD MFS_GLUT_like 68 485 - -
Sto1g0270 504 TIGRFAM SP: MFS transporter, sugar porter (SP) family 66 494 IPR003663 GO:0016020|GO:0022857|GO:0055085
Sto1g0270 504 SUPERFAMILY MFS general substrate transporter 52 495 IPR036259 -
Sto1g0270 504 Pfam Sugar (and other) transporter 66 496 IPR005828 GO:0016021|GO:0022857|GO:0055085
Sto1g0270 504 PANTHER - 22 502 IPR045263 -
Sto1g0270 504 ProSiteProfiles Major facilitator superfamily (MFS) profile. 65 487 IPR020846 GO:0022857
Sto1g0270 504 Gene3D MFS general substrate transporter like domains 59 498 IPR036259 -
Sto1g0270 504 ProSitePatterns Sugar transport proteins signature 1. 121 138 IPR005829 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0270 Sto-Chr1 2037404 2042760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0270 29 443 Organic Solute Cotransporters AT1G67300 67.139 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0270 - - gmx:100811182 783.867