Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0247 ATGCCGAACCAGGTGAAGGTGAAAGACCTCCTCGAGGAAGGGAAGAGGCGGATTGTGTTTCTGATCATATGCGTCGTGGGGCTGTCATATATATTGTCGGTGACAAGCTCATCAGTATGGGTCAACTTGCCAACTGCTGCCTTCCTTGTCATTATCCTCCGTTATATATCACTAGATTTTGAAATGAAGAGAAAAGCTGCAGCATACAACAATAAACCCTGCACAACCAGTGCTCAGTCATCAAAAAAACCTCTTGAATGCCCTAAAGTTGTTGCAAATTCTGAGTGGAGAGCAAAAGTGAATTCTCCTATTGTTGAGGATGCAATAGATCACTTCACCAGACATCTAGTCTCTGAGTGGGTGACTGACCTGTGGTACTCTCGCTTAACACCAGATAGAGAGGGTCCTGAGGAATTAGTGCAAATAATAATTGGTGTTCTTGGGGAAATTTCAGGACGCATGAGGCAATTAAATCTGGTTGATCTTTTGATAAGGGATCTTATCAATCTCGTTTGTTCACACTTGGAGCTATTTCGTGCTGCTCTTGCAAATATTGAAAAGCAACATTCATCTTCATTAACAACTGAGTGTCGAGATACAGAACTGAAACTTGTATTGGCTGCTGAGAACAAATTACATCCTGCTTTATTTTCTGCTGAAGCTGAGCTTAAGGTTCTGCAACATTTGATGGATGGCCTTGTTTCAGTCACTTTCAAGTCTGAGGATTTGCGCTGCTCATTCTTCCGTTACACTGCTAGGGAGCTACTTGCATGTGCCGTGATGCGACCTCTTCTTAACTTAGCCAGTCCAAGAAATGCACAGTCATCTGCAAAAGATAATGCCAACGATAGTATTTCTAAAGATCCGTTGCTTTCAATTGATGCTCAATCATCCCGTTCATGGAAATCACTGCCATCAAACTCCCAAATTAATGATGACATAGGTATTCAACAATATCACTCAGGAGGGCAGTGGGGTGACAGCTTAGATCACATGTCCCAGAGAAGGACCCAAGCCCTTGCTCCAGAACATTTTGAGAATGTGTGGACAAAAGGGAGAAATTACAAGAAAAAAGATAGGGAGAATCAGTTAAATGATCATAAAAAGGTGATATCTAGACCAAACAAAGAAACTAATTCTAAATGTAATCCCTCCAAGGGTTGCAATACTAATTTGGGATGCAGTAGTCGGTTTACCATGGAAAACACACCATTTTGTGCAGACAGGAGTAGATCAACTTGCCCTTCAGTTACATCATTTCAAGATGATGAGCATGATCACATGCATCTGCAGATGGTTGATTCTGGGAGCAGTACTTCTTATACTTCTGAAGATGGTGAAACTAGTAGTGTCACTGGTCTTGATTCCCCAGTAACTAAAGTTTGGGATGGAAGAAATAATAGAAATCGGGCTGTTTCTTACATTCATCACCCACTTGAAAATTTTGATTGTCATAGTAcagaaaagataaataaaaaacaatctcGCTATAAGAGATTACCCAGAACCCAATTTGACTCGAAAAGGTCCAGGCCAACTGGTCATAACGTGCATATTTGGCTTGAAGTTAATAGAACTAGCTTTTTATCTGGAGATGGACAGGATTTACTTAGTCCTTTGAAATCACATGTAAATTCTGAGGACTGTTGCGATGATGCTGATATTAATAATTTGGGCAGAATACATAGTGGAGCAGCGGCGTCTTCTTCAGCATCCTCTACTCCTAAATCAGAATCCTGTAGTTTGGCTGTTAATCCCCTGAAAAGTTCATTGGCAGTAGATTCCTTTTACAAATTGAAATGTGAGGTGGTAGGAGCAAATATTGTGAAGAGTGGTTCAAGAACATTCGCTGTTTATTCCATATCTGTTACAGATGTAAATAATAACAGTTGGTCTATTAAAAGAAGGTTTCGTCATTTTGAGGAGCTACATCGGCACCTAAAAGAGTTTCCTGAGTATGATCTACATTTGCCTCCGAAACATTTTCTCTCGACAGGTTTTGATGTACCTATCATTCAAGAGCGTTGTAAGTTGTTGGACATATATTTGAAGGTCGGAAACTTAAGTCCCTTGATAATGCTTATTGCTCCTCAGAAGCTTATGCTGCTTCCGAAAATTTCAGGATCAATTGAAGTATGGGACTTTCTTAGTGTTGATTCTCAGACATACCTATTCTTGAGTTCATTTTCTATTATCAAAACATTGTCAGTTAACTTGGAAGATAAGCCATCTGAGAAAAGTACAAGCAGTTCCAATTTTTCTGTGTGTGACCCCTTTGCCTCAAGAAGAGAAAACAACAGCGTTGAAAGTAAAGAGACAGTTTTGCGAACAAGAAATAATGGTGTGGCTGACAGAATGAGGCCAAAAGTAAATGGCATGCCTCTCTCTTCACCAAACGCTCTTGGAAAGGAATCTAGAAAGGTAATTCAAAATTCTGGCGGTAATACAAATACTGGAGCATGGAAGGATGAAGCCTCTCCCAAGAAGTCGCAGAAGACAGTGAAAGAAGAGATGGTGTCTCCAAATTTGAGTGTTCCCATATTGGATCTGGTTGATGTTATCTTCCAGCTTCAAGATGGTGGATGGATTAGACGGAAAGCTTTTTGGGTTGCTAAACAGATCCTACAACTAGGAATGGGTGATGCCTTAGATGATTGGTTGATAGAGAAAATCCAGCTTCTCCGTAAGGGATCAGTGATTGCTTCTGGGGTCAGGCGAGTTGAGCAAATGATAAGCAGCACAGGAGCAGATCGCTGTGCGAAGTTTGTATATGATCTAATCATTGATCATGCGCCAGCAGCAATTGTAGGCCTTGTTGGTCGCAAGGAGTATAAACATTGTGCTAGGGATCTCTATTTTCTTCTTCAGTCATCTGTTTGTATGAAGCAGCTGGCTTTTGACATTCTTGAAGTACTACTGTTGTCGGCATTTCCTGAACTAGATTATGTATTCAAGCAGTTGCACGAAGAAAAGCACAAGTTCGGAGAATTAAGAAAGACGTGA 3003 0.4036 MPNQVKVKDLLEEGKRRIVFLIICVVGLSYILSVTSSSVWVNLPTAAFLVIILRYISLDFEMKRKAAAYNNKPCTTSAQSSKKPLECPKVVANSEWRAKVNSPIVEDAIDHFTRHLVSEWVTDLWYSRLTPDREGPEELVQIIIGVLGEISGRMRQLNLVDLLIRDLINLVCSHLELFRAALANIEKQHSSSLTTECRDTELKLVLAAENKLHPALFSAEAELKVLQHLMDGLVSVTFKSEDLRCSFFRYTARELLACAVMRPLLNLASPRNAQSSAKDNANDSISKDPLLSIDAQSSRSWKSLPSNSQINDDIGIQQYHSGGQWGDSLDHMSQRRTQALAPEHFENVWTKGRNYKKKDRENQLNDHKKVISRPNKETNSKCNPSKGCNTNLGCSSRFTMENTPFCADRSRSTCPSVTSFQDDEHDHMHLQMVDSGSSTSYTSEDGETSSVTGLDSPVTKVWDGRNNRNRAVSYIHHPLENFDCHSTEKINKKQSRYKRLPRTQFDSKRSRPTGHNVHIWLEVNRTSFLSGDGQDLLSPLKSHVNSEDCCDDADINNLGRIHSGAAASSSASSTPKSESCSLAVNPLKSSLAVDSFYKLKCEVVGANIVKSGSRTFAVYSISVTDVNNNSWSIKRRFRHFEELHRHLKEFPEYDLHLPPKHFLSTGFDVPIIQERCKLLDIYLKVGNLSPLIMLIAPQKLMLLPKISGSIEVWDFLSVDSQTYLFLSSFSIIKTLSVNLEDKPSEKSTSSSNFSVCDPFASRRENNSVESKETVLRTRNNGVADRMRPKVNGMPLSSPNALGKESRKVIQNSGGNTNTGAWKDEASPKKSQKTVKEEMVSPNLSVPILDLVDVIFQLQDGGWIRRKAFWVAKQILQLGMGDALDDWLIEKIQLLRKGSVIASGVRRVEQMISSTGADRCAKFVYDLIIDHAPAAIVGLVGRKEYKHCARDLYFLLQSSVCMKQLAFDILEVLLLSAFPELDYVFKQLHEEKHKFGELRKT 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0247 1000 Pfam PX domain 628 684 IPR001683 GO:0035091
Sto1g0247 1000 Gene3D - 597 724 IPR036871 GO:0035091
Sto1g0247 1000 Pfam PXA domain 102 270 IPR003114 -
Sto1g0247 1000 MobiDBLite consensus disorder prediction 357 375 - -
Sto1g0247 1000 SUPERFAMILY PX domain 598 719 IPR036871 GO:0035091
Sto1g0247 1000 MobiDBLite consensus disorder prediction 811 835 - -
Sto1g0247 1000 MobiDBLite consensus disorder prediction 435 455 - -
Sto1g0247 1000 Pfam Sorting nexin C terminal 862 958 IPR013937 -
Sto1g0247 1000 ProSiteProfiles PX domain profile. 597 723 IPR001683 GO:0035091
Sto1g0247 1000 PANTHER PHOX (PX) DOMAIN-CONTAINING PROTEIN 275 997 - -
Sto1g0247 1000 PANTHER PHOX (PX) DOMAIN-CONTAINING PROTEIN 3 271 - -
Sto1g0247 1000 ProSiteProfiles PXA domain profile. 102 278 IPR003114 -
Sto1g0247 1000 SMART PX_2 601 719 IPR001683 GO:0035091
Sto1g0247 1000 SMART PXA_3 102 282 IPR003114 -
Sto1g0247 1000 MobiDBLite consensus disorder prediction 357 386 - -
Sto1g0247 1000 PANTHER PX SERINE/THREONINE KINASE PXK 275 997 - -
Sto1g0247 1000 PANTHER PX SERINE/THREONINE KINASE PXK 3 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0247 Sto-Chr1 1854658 1862037 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0247 K17925 - gmx:100790491 1206.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0247 1 1854658 1862037 Sto1g0247 1 1854658 1862037 ECH