Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0215 ATGGGTGCTTCTCTGCCCCCCAAGGAGGCCAACCTCTTCAAGCTTATTGTTAAATCATATGAAACCAAACAATACAAAAAGGGACTCAAAGCTGCTGATGccattttgaaaaaatttccagACCATGGagAAACTTTATCAATGAAGGGTTTGACATTGAATTGTATGGATCGCAAGTCTGAAGCATATGAGCTTGTTCGTCAAGGATTAAAGAATGACCTTAAAAGCCATGTTTGCTGGCATGTTTATGGTCTTCTTTATCGGTCAGACAGAGAATATAGGGAGGCAATTAAGTGCTACCGGAATGCACTGAAAATAGATCCTGACAATATTGAAATCCTACGTGACCTATCACTCTTACAGGCTCAAATGCGAGACTTAGCTGGCTTTGTTGAGACAAGACAACAACTTCTGACTCTTAAGCCAAATCATCGTATGAACTGGATTGGCTTTGCTGTTTCCCACCATTTGAATTCTAATGCATCCAAGGCAGTTGAGATTTTGGAAGCATATGAAGGGACATTAGAAGATGATTATCCTCCAGAAAATGAACGGTGTGAGCATGGGGAAATGCTTTTATATAAGGTCTCGATGTTAGAGGAATGCGGACTTCTTGAGAGAGCTCTTGAGGAGTTGCACAAAAAGGAATTGAAAATTGTTGATAAGCTAGCGTATAAAGAGCAAGAGGTTTCACTTAGAGTGAAGCTTGGTCACTTGGAAGAAGGTGAAAAATTATATCGGGCACTGCTGTCCATGAATCCTGACAACTATAGATACTATGAAGGCCTCCAAAAATGTGTTGGGTTGTATTCGAATAATGGTCATTATTCTCCAGATGAAATAGATCGGTTGGATGCTTTGTACAAATCACTTGAGCAGCAGTATAAGTGGTCTTCTGCTGTTAAGAGAATACCACTTGATTTTCTGCAAGGTGACAAGTTTCTAGAAGCAGCAGAAAATTATATCAGGCCTCTCCTAACTAAGGGAGTTCCGTCGCTGTTCTCTGATCTTTCTTCCTTGTACAATCACCCTGGGAAGGCAGATATTTTGGAGCAACTTATTTTGGAGTTGGAGAATTCAATTAGGACAACTGGCCAGTACCCTGGAATGGTGGACAAGGAGCCCCCGTCAACTCTGATGTGGACTTTGTTTTTATTGGCTCAGCATTACGACAGGCGGGGCCAATATGAAATTGCTCTTTCTAAAATTGATGAGGCTATTGAACATACACCTACTGTGATTGATCTTTATTCTGTCAAGAGTCGGATATTGAAGCATGCTGGTGATTTGGTTGCTGCTGCTGCTCTTGCAGATGAAGCTAGGTGTATGGATCTTGCTGATCGATATATCAATAGCGAATGTGTTAAGCGCATGCTGCAGGCTGATCAGGTGGCCCTGGCAGAAAAAACCGCTGTCTTGTTCACAAAAGATGGGGATCAACACAACAACCTCCATGACATGCAGTGCATGTGGTATGAGCTGGCCTCTGGTGAAAGTTATTTCCGCCAAGGTGATCTTGGACGGGCTCTTAAGAAGTTTTTGGCGGTGGAGAAGCATTATGCAGATATTACTGAAGACCAATTTGATTTTCATTCATACTGCTTACGGAAAATGACTTTGCGTACTTATGTGGAAATGCTTAGATTTCAAGATCGATTGCACTCACATTCATATTTTCATAAAGCAGCAGCTGGAGCAATCAGATGTTACCTGAAATTGTATGATTCTCCTTCAAAGTCTACAGCTGAGCAGGATGATGACATGTCAAAGTTGCTTCCTTCccagaaaaagaaattgaggcAAAAACAGAGAAAGGCTGAAGCACGGGCTAAGAAAgaGGCAGAGGAAAAGAATGAAGAGTCTAATGCTGGTGGAGTGTCAAAGTCTGGAAAACGGCATGCAAAACCTGTTGACCCAGATCCACGTGGTGAAAAGTTGTTGCAgGTTGAAGATCCGCTGTCAGAAGCCACAAAATATTTGAAGTTGCTGCAGAAGAACTCACCTGATTCATTGGAGACACACTTACTGTCTTTTGAATTGTATATCAGAAAACAGAAGATTTTGCTTGCCTTCCAGGCTGTAAAGCAGTTATTGAGGTTGGATGCTGAACACCCTGATTCTCATCGTTGCTTGATTACCTTCTTTCATAAAGTGGGATCCATGAAGGTTCCTGAGACTGACAGCGAGAAGCTCATTTGGAGTGTCTTAGAAGCTGAGCGCCCAACTATTAGTGATTTGCATGAGAAATCTCTGTTTGAGGCAAATAACTCTTTccttgaaaaacataaagATTCCTTGATGCACAGAGCTGCTGCTGCAGAAATGTTGTACACTTTGGATCCCAGTAGAAAATCTGATTCAGTCAAGTTGATAGAAGAGTCACCAAATGACTTTGTGCCAAGAAATGGAGCACCCGGACCAATTAGGGAATGGAAACTCAAAGATTGCATTGTGGTTCATAAACTTCTTGGAACAGTTCTTGTTGAGCCAGATGCTGCATTGAGATGGAAAGTGCGTTGTGCTGAGCTTTTCCCTTATTCTACATTCTTTGAGGGCAGCCGCAGTTCTGCCTCTCCCAACTCGGCTTTCAATCAGATATCTATTAAGTTCGAAAATGGGAATCTTAACCATTCAGTGGGTGGTCCAGATGTTGACTCCTTCACATCAAATGGGAAACTGGAGGCATTTAAAGATCTCTCCATATCACAAAGTTGA 2715 0.411 MGASLPPKEANLFKLIVKSYETKQYKKGLKAADAILKKFPDHGETLSMKGLTLNCMDRKSEAYELVRQGLKNDLKSHVCWHVYGLLYRSDREYREAIKCYRNALKIDPDNIEILRDLSLLQAQMRDLAGFVETRQQLLTLKPNHRMNWIGFAVSHHLNSNASKAVEILEAYEGTLEDDYPPENERCEHGEMLLYKVSMLEECGLLERALEELHKKELKIVDKLAYKEQEVSLRVKLGHLEEGEKLYRALLSMNPDNYRYYEGLQKCVGLYSNNGHYSPDEIDRLDALYKSLEQQYKWSSAVKRIPLDFLQGDKFLEAAENYIRPLLTKGVPSLFSDLSSLYNHPGKADILEQLILELENSIRTTGQYPGMVDKEPPSTLMWTLFLLAQHYDRRGQYEIALSKIDEAIEHTPTVIDLYSVKSRILKHAGDLVAAAALADEARCMDLADRYINSECVKRMLQADQVALAEKTAVLFTKDGDQHNNLHDMQCMWYELASGESYFRQGDLGRALKKFLAVEKHYADITEDQFDFHSYCLRKMTLRTYVEMLRFQDRLHSHSYFHKAAAGAIRCYLKLYDSPSKSTAEQDDDMSKLLPSQKKKLRQKQRKAEARAKKEAEEKNEESNAGGVSKSGKRHAKPVDPDPRGEKLLQVEDPLSEATKYLKLLQKNSPDSLETHLLSFELYIRKQKILLAFQAVKQLLRLDAEHPDSHRCLITFFHKVGSMKVPETDSEKLIWSVLEAERPTISDLHEKSLFEANNSFLEKHKDSLMHRAAAAEMLYTLDPSRKSDSVKLIEESPNDFVPRNGAPGPIREWKLKDCIVVHKLLGTVLVEPDAALRWKVRCAELFPYSTFFEGSRSSASPNSAFNQISIKFENGNLNHSVGGPDVDSFTSNGKLEAFKDLSISQS 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0215 904 MobiDBLite consensus disorder prediction 580 646 - -
Sto1g0215 904 Pfam N-terminal acetyltransferase A, auxiliary subunit 187 696 IPR021183 -
Sto1g0215 904 PANTHER BNAC02G23120D PROTEIN 10 883 - -
Sto1g0215 904 MobiDBLite consensus disorder prediction 580 594 - -
Sto1g0215 904 SMART tpr_5 43 76 IPR019734 GO:0005515
Sto1g0215 904 SMART tpr_5 380 413 IPR019734 GO:0005515
Sto1g0215 904 SMART tpr_5 77 110 IPR019734 GO:0005515
Sto1g0215 904 PIRSF NAT_A 1 818 IPR021183 -
Sto1g0215 904 Coils Coil 596 623 - -
Sto1g0215 904 SUPERFAMILY TPR-like 18 158 IPR011990 GO:0005515
Sto1g0215 904 ProSiteProfiles TPR repeat profile. 77 110 IPR019734 GO:0005515
Sto1g0215 904 PANTHER N-TERMINAL ACETYLTRANSFERASE-RELATED 10 883 - -
Sto1g0215 904 MobiDBLite consensus disorder prediction 631 646 - -
Sto1g0215 904 Pfam TPR repeat 84 123 - -
Sto1g0215 904 MobiDBLite consensus disorder prediction 606 622 - -
Sto1g0215 904 Gene3D - 505 724 - -
Sto1g0215 904 SUPERFAMILY TPR-like 381 707 IPR011990 GO:0005515
Sto1g0215 904 Gene3D - 2 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0215 Sto-Chr1 1592445 1606167 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0215 K20792 - gmx:100820094 1580.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0367 9 3500842 3514097 Sto1g0215 1 1592445 1606167 CCT
Sto1g0215 1 1592445 1606167 Sto1g0215 1 1592445 1606167 ECH