Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0208 atgggTTCAGAAAGTAGTCCCAAGCTTCCAGTCATTGACTTTAACAAGCGCAAAAACCCCAATAATGATAATGAGTGGGAGGGTGTGAAATCCCAAGTCCACAAAGCCCTTCAAGACTATGGTTGCTTTGAGGCATTGTTTGATAGAGTTCCTTTAGAACTTCTTAAGTCCTTATTTGTTGTACTCAAAGAGCTCTTTGATCTCCCCCTTCAAACCAAGCAACTCAATGTGTCAAATACGCCCTTCCATGGTTATGTTGGTCAATACCCTCAAGTCCCACTTTATGAGAGCCTTGGTATTAACGATGCATGTATCTCTCACAAAGTAGAAACCTTGGAAAAGACCTTGTGGCCTCAAGGAAACCCTAGTTTCAGCAAAAGTATACAATCGTTCGCAGAGCAGGTATCAGAGTTGGATGAAATAGTGAGGAAGATGATTTTGGAGAGTTTGGGTGTTGAAAAGTACATGGAGGAGCACATGAGCTCAAGCAGTTACACTGTGAGGGTTATGAGATATGAAGGGCCTCAAACTGAAGAGGCAAAGTTAGGTATTACTTCTCACACAGATAAGAACATAATAACCATACTACACCAATTAAATGAAATTCAAGGTTTAGAGGTTAAAACCAAAGATGGAGAATGGATCACTTATCACCCCTTGTCACCTCACAGTTTTGTCGTTATGATTGGTGATGCTTTCCATGCATGGACAAATGGGAGGGTATATTCAACATTTCACAGAGTGATGATGAGAGGAAATGAAGCAAGATACTCAGTGGGACTATTTTCTGCACCAAAAGAAGGGCACATTGTAAAAACTCCAGAGGAGCTTGTGGATGAGCAACATCCTTTGCTCTTTAAGCCCTACAATCATCAAGAATTTCTCAAGTACTTCTACACTGGATTAGAAGCACAAACACAGAAATTTGGTTTGAAGACATTCTGTGGTGTTTGA 954 0.4036 MGSESSPKLPVIDFNKRKNPNNDNEWEGVKSQVHKALQDYGCFEALFDRVPLELLKSLFVVLKELFDLPLQTKQLNVSNTPFHGYVGQYPQVPLYESLGINDACISHKVETLEKTLWPQGNPSFSKSIQSFAEQVSELDEIVRKMILESLGVEKYMEEHMSSSSYTVRVMRYEGPQTEEAKLGITSHTDKNIITILHQLNEIQGLEVKTKDGEWITYHPLSPHSFVVMIGDAFHAWTNGRVYSTFHRVMMRGNEARYSVGLFSAPKEGHIVKTPEELVDEQHPLLFKPYNHQEFLKYFYTGLEAQTQKFGLKTFCGV 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0208 317 Pfam 2OG-Fe(II) oxygenase superfamily 168 263 IPR044861 -
Sto1g0208 317 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 5 316 - -
Sto1g0208 317 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 163 265 IPR005123 -
Sto1g0208 317 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN 5 316 - -
Sto1g0208 317 Pfam non-haem dioxygenase in morphine synthesis N-terminal 9 87 IPR026992 -
Sto1g0208 317 MobiDBLite consensus disorder prediction 1 23 - -
Sto1g0208 317 SUPERFAMILY Clavaminate synthase-like 5 300 - -
Sto1g0208 317 Gene3D - 7 313 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0208 Sto-Chr1 1509402 1528379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0208 3 307 Glycosyltransferase AT5G59530 25.387 3.76e-15 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0208 - - gmx:100784444 456.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0208 1 1509402 1528379 Sto1g0208 1 1509402 1528379 ECH