Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0198 ATGGCGAAGGGAGGGCAATGCTTCGAGAAGGTTCGGAGGTGCATTCGGACGGTTTTCTTCATGGTGGCAATGCTGGCGTCCTTGTTGGTTACGTCCTTGCCGGTGCTCGTGGCGGTGGTCGATGTGTTGGTGCCTTGCGTTTTGATCTCTAGCTTTACGTGCGTTAGGTGCTACGGTTTTAAAGAGCATTTGCGTCGATACACTTTCAAGAGCTCCTTGACAGACATTCCGCTCGTTTCTGTCATAAGATCCCTCATCATTATATGTGTTTATAGCATTTGCGATGGCTCTGCTCTATCACATGGCCCTTATCTTGGAACTGTGTCACTGTGTTCCTTTCTCTCAATTGCTCTTCTTTCAGTCAAAGCTTGTATTTTCACAGTAAATTCTCAAATTGAAGCAGAAGCATCAGCTTCTCTTTCAAGGCAGAGACTCCATTTGAAGAAGTCATGGGGAATGCCTGTACTATTCCTCTCGTCAGTTGTGTTTGCTCTTGGCCACACTGTGGTTGCTTATAGAACCAGCTGCAGAGCACGGAGAAAGCTATTGTTCCACCGGGTTGATCCAGAAGCTGTCCTTTCATGCAAAGTTTTCTCCAGTTACCAGAAGGTACCACGATCTCCTACTCCTTCTGGGGTGAGAACTCCAAAAAGTGACAGTGAAATCAGGCGGAAACCTTTTGCTACAGCCTGTGATGAAGAACTGCCAGTCGGATTACTTGCAGACTCAGACAGCTCATTCATTACATGTCAAGGGCTTACTCTCCACTACAAGGTCAGCTTGCCCGGTTCACCTCCACATACCTTGTCCTCCCCGTCCTTCCTTGAATCAAATTCTAGCTGCAACACTTCATTAATGGCTGGGGGATTGGCTAAACTTAATAGGCATTTGACTCATATGTCTCCAAATATCCAGCGACAACTATACAGGAGCTATAGCAATCAATTCAATGGCTCATCTCTGTATGCTCCTCTTTTAGATGGTCATATGACTTCTACTGTTCTTTCTGAAGATATACCTGTTCTATGCCTAGATAAAATTCATGAAGAAGAAACAAGTAAATTGGATTCTatgaatttggagaaaaacTTGGATGGTACTACTGGTGAATTAGGTATTGTTTTAGTACATGGGTTTGGTGGAGGAGTCTTTTCTTGGAGGCATGTGATGGGACCCATTGCTCGACAGAGTAATTGTGCAGTTGCTGCATTTGACAGGCCTGGTTGGGGATTGACTTCAAGGCCGCGTCGAAAAGAGTGGGAGGAAAAGGATTTGCCTAACCCATATAAGCTTGAGAGCCAGGTTGACCTACTTTTATCATTTTGTTCTGAAATTGGATTCTCTTCCGTTGTGCTAATCGGTCATGATGATGGAGGGTTGCTTGCTTTGAAGGCTGCACAAAGAGTTCAATCCTCGATGAATTCTTCTAATGTTCTCATTAAAGGGGTTGTATTGCTAAATGTTAGCTTGTCAAGAGAAGTGGTTCCTTCCTTTGCAAGGATCCTTCTGCATACATCACTTGGAAAGAAGCACTTAGTTCGTCCTTTATTAAGAGCAGAAATTACTCAAGTGGTGAACCGTCGTGCTTGGTATGATGCTACCAAGCTGACAACAGAAGTTTTGACTCTTTATAAGGCTCCACTTTGTGTAGAGGGATGGGATGAAGCACTTCACGAGATAGGTAAATTGTCATCTGAAACCATACAATCGGCCAAAAATGCAGAATTGTTGCTACAAGCGGTGGAAGACATCCCAGTGTTGGTCATTGCAGGTGCTGAAGATTCCCTTGTGTCTCTTAAATCTTGTCAAGCTATGGCCTCAAAATTTGTAAATTCTAGACTGGTTGCAATATCTGGATGTGGCCACCTACCACATGAGGAGTGTCCGAAGGCGTTGCTTGCTGCCATATCGCCCTTCATTAGTAGACTCTTGTCACTATCAGACTTACAAAGCCAATAG 1959 0.44 MAKGGQCFEKVRRCIRTVFFMVAMLASLLVTSLPVLVAVVDVLVPCVLISSFTCVRCYGFKEHLRRYTFKSSLTDIPLVSVIRSLIIICVYSICDGSALSHGPYLGTVSLCSFLSIALLSVKACIFTVNSQIEAEASASLSRQRLHLKKSWGMPVLFLSSVVFALGHTVVAYRTSCRARRKLLFHRVDPEAVLSCKVFSSYQKVPRSPTPSGVRTPKSDSEIRRKPFATACDEELPVGLLADSDSSFITCQGLTLHYKVSLPGSPPHTLSSPSFLESNSSCNTSLMAGGLAKLNRHLTHMSPNIQRQLYRSYSNQFNGSSLYAPLLDGHMTSTVLSEDIPVLCLDKIHEEETSKLDSMNLEKNLDGTTGELGIVLVHGFGGGVFSWRHVMGPIARQSNCAVAAFDRPGWGLTSRPRRKEWEEKDLPNPYKLESQVDLLLSFCSEIGFSSVVLIGHDDGGLLALKAAQRVQSSMNSSNVLIKGVVLLNVSLSREVVPSFARILLHTSLGKKHLVRPLLRAEITQVVNRRAWYDATKLTTEVLTLYKAPLCVEGWDEALHEIGKLSSETIQSAKNAELLLQAVEDIPVLVIAGAEDSLVSLKSCQAMASKFVNSRLVAISGCGHLPHEECPKALLAAISPFISRLLSLSDLQSQ 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0198 652 SUPERFAMILY alpha/beta-Hydrolases 369 642 IPR029058 -
Sto1g0198 652 Pfam Alpha/beta hydrolase family 373 634 IPR000073 -
Sto1g0198 652 PANTHER ALPHA/BETA FOLD HYDROLASE 5 644 - -
Sto1g0198 652 Coils Coil 646 652 - -
Sto1g0198 652 PRINTS Epoxide hydrolase signature 377 395 IPR000639 GO:0003824
Sto1g0198 652 PRINTS Epoxide hydrolase signature 452 465 IPR000639 GO:0003824
Sto1g0198 652 PRINTS Epoxide hydrolase signature 584 600 IPR000639 GO:0003824
Sto1g0198 652 PRINTS Epoxide hydrolase signature 617 639 IPR000639 GO:0003824
Sto1g0198 652 PANTHER HYDROLASE 5 644 - -
Sto1g0198 652 Gene3D alpha/beta hydrolase 359 643 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0198 Sto-Chr1 1384659 1389377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0198 1 648 Miscellaneous Gene Families AT1G80280 65.460 0.0 811
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0198 - - gmx:100817742 1004.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0395 9 3855612 3860061 Sto1g0198 1 1384659 1389377 CCT
Sto1g0198 1 1384659 1389377 Sto1g0198 1 1384659 1389377 ECH