Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0162 ATGCTTACACTAAACTCCATgttctcttccttcttcctttgGCTTCTTCTCATCTTCTCCGTATTATCTCCTCATGTGATGGAGCATGCAGTATCGTCAAAATGGACATACGGAGTCAATTACGGAAGAATAGCAGACAACCTCCCTTCTCCTCACAGTGTGGTAACTCTCCTCAAAGCCgccaaaataaaaaacatcCGAATCTACGACGCCGACCATCAAGTCCTCACCGCCTTCCAATCCTCCGGCATCGAAATCATCATCGGACTCCCCAAcgaattcctcaaagacatcagCGTCGCCGAGGACCGAGCCATGGACTGGATCAAAGTCAACGTCCAGCCCTTCCTTCCCGCCACCAAGATCCGCGGGATCGCCGTCGGAAACGAGATCCTCGGCGGCACCGATGTGGGACTCTGGGAGGCCCTCCTCCCCGCCGCCAAAAATGTCTATTCTGCCCTCTCCCGCCTCGGCCTGGCCCACACCGTCCAAGTCCAGAGCCCACATTCCGAGGCCGTTTTCGCCAATTCCTTCCCTCCTTCTTCCTGCACTTTCCGCGATGACGTGGCCCCTTTCATGAAGCCTCTACTGCAATTCTTCACCCAAATCGGGTCCCCTTTCTTCATCAACGCTTACCCTTTCCTCGCGTATAAGAACGAGCCTCAACATATAGATCTCAATTACGCTCTGTTTAAGAAGAGTCCTGGGATTTATGATGCGAAGACGAAACTTCATTATGATAATATGTTTGAGGCTCAGATTGATGCGGCTTATGCGGCGTTGGAGAAAGCTGGGTTTGAGAAGATGGAGGTTGTGGTGTCTGAAACAGGGTGGGCCTCACGTGGGGATGAGAATGAAGCTGGGGCTACGTTGAAGAACGCGAGGACTTATAATAAGAATTTGAGGAAGAGGTTGTTGAAGAAGAAGGGGACGCCTTATAGGCCTAAGATTGCTGTGAGAGCTTATGTGTTTGCTCTGTTTAATGAGAATTTGAAACCGGGCCCCACATCGGAGAGGAACTTTGGGTTGTTTAAGCCTGATGGTAGTATTGCTTATGATATTGGATTTACTGGACTTAAGGCTTCTTCCGCAACTTCAATACGTGTTCTTTCCTTTAAGGGTATTGGATCTTCGTACATATTGGGTTTTACGAGttgcttctctcttcttcttcttttggcgTTATGA 1188 0.4604 MLTLNSMFSSFFLWLLLIFSVLSPHVMEHAVSSKWTYGVNYGRIADNLPSPHSVVTLLKAAKIKNIRIYDADHQVLTAFQSSGIEIIIGLPNEFLKDISVAEDRAMDWIKVNVQPFLPATKIRGIAVGNEILGGTDVGLWEALLPAAKNVYSALSRLGLAHTVQVQSPHSEAVFANSFPPSSCTFRDDVAPFMKPLLQFFTQIGSPFFINAYPFLAYKNEPQHIDLNYALFKKSPGIYDAKTKLHYDNMFEAQIDAAYAALEKAGFEKMEVVVSETGWASRGDENEAGATLKNARTYNKNLRKRLLKKKGTPYRPKIAVRAYVFALFNENLKPGPTSERNFGLFKPDGSIAYDIGFTGLKASSATSIRVLSFKGIGSSYILGFTSCFSLLLLLAL 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0162 395 Gene3D Glycosidases 36 362 - -
Sto1g0162 395 SUPERFAMILY (Trans)glycosidases 37 355 IPR017853 -
Sto1g0162 395 PANTHER GLYCOSYL HYDROLASE SUPERFAMILY PROTEIN 11 379 - -
Sto1g0162 395 Pfam Glycosyl hydrolases family 17 38 356 IPR000490 GO:0004553|GO:0005975
Sto1g0162 395 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 11 379 IPR044965 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0162 Sto-Chr1 1176802 1178653 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0162 28 371 Glycoside Hydrolase AT3G15800 77.101 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0162 - - gmx:100815468 596.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0162 1 1176802 1178653 Sto1g0162 1 1176802 1178653 ECH