Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0157 ATGTCTGCTGCCGTGTGTGGAAGCAAGAGATCTTTCTTTGAAGACCTTCCTCCATCACCGCCATTATCCAAGAGGCTTCGTTGCTCTTCTTCTACCTCGCCGGTTCGTTTATCGCCTCCGAGTCTCATCGATCATCTTCGGGCTGTGTTTCCTCGCATGGAAGTCCAGGTCCTTGAGAGAGCACTTCAAGAATGTGGCTACGATATAGATGCTGCCATCAAGAGCCTGCATGAGCTTTGCTTGAGTCTCTCTGATGAGGCATTGACAGCTTTTGAAAAACATGAAGGTAAATCAACAGATGATCTGGATGCTTCTACTTCTGAGAATAAGATGGCTTCAAGCAACCTTCCTGTAGATGGAGCAGAATGGGTTGATCTGCTTGTAAGAGAAATGTCGAGTGCTACTAGTTTTGATGATGCCAAAGCCCGTGCTGCTAGAATTCTGGAGGTTCTGGAAAAATCAATCAGTGAACGTGCAAGTGCCGAGGCAACAAATGTTATTAAAAATGAAAATATGGTGCTGAAGGAACAAATTGAACAATTGAAGCTTACGGTGTCTCAATACCAGGAGCAGTTGAGAACTCTTGAGGTGAATAACTATGCTTTGGCAATGCATTTGAAGCAGGCTCAACAAGTCAACTCCTTTCCCGGGCGTTTCCCCCCAGATGTTTATTAA 675 0.4504 MSAAVCGSKRSFFEDLPPSPPLSKRLRCSSSTSPVRLSPPSLIDHLRAVFPRMEVQVLERALQECGYDIDAAIKSLHELCLSLSDEALTAFEKHEGKSTDDLDASTSENKMASSNLPVDGAEWVDLLVREMSSATSFDDAKARAARILEVLEKSISERASAEATNVIKNENMVLKEQIEQLKLTVSQYQEQLRTLEVNNYALAMHLKQAQQVNSFPGRFPPDVY 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0157 224 Coils Coil 171 198 - -
Sto1g0157 224 Gene3D - 39 86 - -
Sto1g0157 224 Pfam CUE domain 41 76 IPR003892 GO:0043130
Sto1g0157 224 CDD CUE 41 76 - -
Sto1g0157 224 ProSiteProfiles CUE domain profile. 38 83 IPR003892 GO:0043130
Sto1g0157 224 SUPERFAMILY UBA-like 40 80 IPR009060 GO:0005515
Sto1g0157 224 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 179 223 - -
Sto1g0157 224 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 181 - -
Sto1g0157 224 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 181 - -
Sto1g0157 224 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 179 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0157 Sto-Chr1 1096706 1098749 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0157 - - zju:107407473 275.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto9g0441 9 4313992 4318563 Sto1g0157 1 1096706 1098749 CCT
Sto1g0157 1 1096706 1098749 Sto1g0157 1 1096706 1098749 ECH