Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0152 ATGCCCCACAGTGGGAGCCAAATGGTGAATACTTTACAAAGGGGAGGGTCTCCGATTATAAgggtgACTGAAGAGGCTAAAGTGGCGGTGATAGACGTATTGGGGGCTGAAAGCTATCGGGTGTACAGTATCATCGGGGAGTGCACAGTGTTCTCGGACAATGTACAGTATCAGATTATCCCTGCTGTCATGGAGATTGATACACTTGTTAGCTCTGTTACGGCCGATGAGCAATTTGATTTAGAAATACAACCCAGTAAGTGCAGGAGAAAGAAGTCTATTGTGTGGGAATACTTCACAGTAAAAGCTGTTGgagctgattgtgctagggctTACTGTAAACAGTGTAAAAAATCATTTGCGTATGTAAGTGGTTCAAAACTTGCTGGAACAAGTCATCTGAAGCGACACATTGACCTGGGAATCTGTCCAGCAAGTCGCCAGAAAAATCAGCAAAAACCATATTTAAAAACCAGCAGTTCTGGAGATACTGCTCCAAAAAAACGTGCAAGAGCAACCCCTGGATATGGTAGTATCACATTTGACCAGGAACGTAGCAACCAAGAGATtgctaaaatgataattttgcaAGATTATCCACTTCAGATTGTGGAACACCAGGGTTTcattgattttgtgaagactctTCAGCCGCAGTTCAATGTACTAAGCTTTAATGCTGTTCAAGGGGATTGCATCTCTATGTACCTCAGAGAGAAGCAAAACCTATTGAATCTTATCAATGGAATTCCTGGACGTGTCAACCTGACCTTGGATATATGGACTTCTAACCAGACAGTGGGCTATGTTTTTCTTCGGGGACACTTCATTGATGGTGATTGGAATGCACATCATCCTATTCTCAATGTTATTATGGTACCATTTCCTGATTCTGATGATTCCTATAATAAAACTATTTTGACCTGCCTAACAGATTGGCATTTGGAGGGGCGGGTATTTACACTTGCACTTGATCAGTCCTTCTCAAATGAGACTGTGATGGGCAGTCTTAGAGGCCTCCTTTCTGTTAAGAACCCTTTGATCCTCAATGGTCAGTTACTAAGCCAGAATTGTTTTGCTCGTGTTCTTAGTCGCCTTGCTCTAGATGCACTATGGGCAATGAGAGAAACCATTGGCAAAGTTCGGGAGAGTGTGAAGTTAGTGAAAATTTCGAAATCTCATGAAGCAAAGTTCCTTGAGCTAAAACAACAACTTCAAGTCCCCAGTACGAAAAACCTTTTACTTGATGACCAAAGTAAATGGGACACAACTTATCATATGCTTGTTGCTGCCTGTGAAGTAAAGGAAGTCTTTGCATGCTTTGATACATCTGGTCCTGATTACGGAATGACTCTGTCAATGGGTGAATGGATGCAGTTAGAAATTCTCTGCACATATTTGAAGCATCTATTTGATGCAGCTAACATTTTAACTACCCAACCATACCCAACCGCGAACTTATTTTTCTCCGTAGTGTCAAAACTTCAGGTGGAGTTGACTCATGCGTCTTTCAGCCAGGATCCCTTCCTCAGTAATTTGATCAAGCCTTTGCAAGAGAAATTTGATCAATATTGGAGAGAAAGTTGCCTCATCTTGGCAGCTTCTGTAGCCTTGGACCCAAGGTATAAAATGGAACTTGTGGAATCAACCTTTTGTAACATCTTTGGTGAGAATGCTGAGCCATGGATCAGGGTTGTTGAGGATAGTCTTCACGAACTCTTACATGAATATATCGTCGAACTTATTCCTTTTACAGAGACAAATGGAGATGAAGGCAATGATATTATGATTAAGACAGAGCCATGCGAAGAAGGTTCAATTGATGGATCTTTTTTtattgatgaagatggatttccAGACTTTGAAATTTATATCTCTGATATTACCAATAACCGAATCAAGTCAGAATTGGATCAGTATTTGGAAGAGCCTCTGCTACCCAGAGTAGAAGAATTTGACATTCTGAGTTGGTGGAGACTAAACGGATTATATTACCCAACTTTGTCTAGAATGGCATCTGATATTTTGTCTATACCGTTATCCACTCTCTCAGCAGAATCTGTTTTTGACAcacaaataagaaaaatggataGCTACCGAAGTTCATTAAGCTCTATGACTCTTGAGGCCCTTTTTTGTACCAAGGACTGGTTTCAGTGTCAATCACTACCTATAGATGCTTCAAACGCACTAGTGAAGaggtaa 2205 0.39 MPHSGSQMVNTLQRGGSPIIRVTEEAKVAVIDVLGAESYRVYSIIGECTVFSDNVQYQIIPAVMEIDTLVSSVTADEQFDLEIQPSKCRRKKSIVWEYFTVKAVGADCARAYCKQCKKSFAYVSGSKLAGTSHLKRHIDLGICPASRQKNQQKPYLKTSSSGDTAPKKRARATPGYGSITFDQERSNQEIAKMIILQDYPLQIVEHQGFIDFVKTLQPQFNVLSFNAVQGDCISMYLREKQNLLNLINGIPGRVNLTLDIWTSNQTVGYVFLRGHFIDGDWNAHHPILNVIMVPFPDSDDSYNKTILTCLTDWHLEGRVFTLALDQSFSNETVMGSLRGLLSVKNPLILNGQLLSQNCFARVLSRLALDALWAMRETIGKVRESVKLVKISKSHEAKFLELKQQLQVPSTKNLLLDDQSKWDTTYHMLVAACEVKEVFACFDTSGPDYGMTLSMGEWMQLEILCTYLKHLFDAANILTTQPYPTANLFFSVVSKLQVELTHASFSQDPFLSNLIKPLQEKFDQYWRESCLILAASVALDPRYKMELVESTFCNIFGENAEPWIRVVEDSLHELLHEYIVELIPFTETNGDEGNDIMIKTEPCEEGSIDGSFFIDEDGFPDFEIYISDITNNRIKSELDQYLEEPLLPRVEEFDILSWWRLNGLYYPTLSRMASDILSIPLSTLSAESVFDTQIRKMDSYRSSLSSMTLEALFCTKDWFQCQSLPIDASNALVKR 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0152 734 Pfam Domain of unknown function (DUF4413) 479 577 IPR025525 GO:0003677
Sto1g0152 734 SMART bed5 90 146 - -
Sto1g0152 734 SUPERFAMILY Ribonuclease H-like 248 719 IPR012337 -
Sto1g0152 734 Pfam hAT family C-terminal dimerisation region 636 718 IPR008906 GO:0046983
Sto1g0152 734 MobiDBLite consensus disorder prediction 148 178 - -
Sto1g0152 734 SUPERFAMILY beta-beta-alpha zinc fingers 93 139 IPR036236 -
Sto1g0152 734 PANTHER BED FINGER-RELATED 80 724 IPR045259 -
Sto1g0152 734 PANTHER ZINC FINGER BED DOMAIN-CONTAINING PROTEIN DAYSLEEPER-LIKE ISOFORM X1 80 724 - -
Sto1g0152 734 MobiDBLite consensus disorder prediction 148 166 - -
Sto1g0152 734 ProSiteProfiles Zinc finger BED-type profile. 90 150 IPR003656 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0152 Sto-Chr1 1065405 1071894 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0152 - - gmx:106795554 961.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0152 1 1065405 1071894 Sto1g0152 1 1065405 1071894 ECH