Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0133 ATGGGGGGAGCTTGTTCTAGGAAGCAAGAGCAGGACAATGAAGATGGTTCTCATAGAAGACTTTCACGAAGATATTGCAGAATTGGGAGTTTGAAATGGTTGACTTCATCATTTTCTTATCCTTCTATAGATTTTCATTTACAAAAAGGAGAATGTCCATCACTATTGGACTTGTGCATTCGGAAAATATGTGAGGTACTATTTAAACAAAACGATATTCATAAATATAGCACATTTTCTATGGTCCCACGGGATATAAGTCAGCAAATTTTTAATGAATTGGTGTACTCCCAACGTCTAACTAATGCTTCCCTCAAAGCTTTTCAAGATTGTGCTCTCCAGGATTTTTACTTGGGAGAATATCCTGGTGTGGATGACAGTTGGATGCACATCATTTCATCACAGGGGTCATCTTTACTATCTCTGGATCTTTCTGGGTCCGATGTCACTGATTATGGGTTAACTTATCTTAAAGATTGCAACAATCTCCAAACCTTGAATCTTAATCACTGTGACCAGATTTCAGACCATGGCCTGGAGTATATCAGTGGTTTGTCAAACTTGGCAAGTTTGAACTTTAGAAGAAACAATGACATTTCTGCTCAAGGAATGAGTACCTTTTCTGCTCTTGTTAACTTGGTCAAGTTGGATTTGGAGAGATGTCCTGGGATTCATGGAGGCCTTGTTCATCTTCGAGGTTTAACCAAGTTGGAATCTCTTAATATGAAGTGGTGTAATTGCATAACAGATGCTGATATGAAGCCTCTATCAGAGCTTACAAACTTGAAGAGTCTAGAGATTTCGTGCAGTAAAGTCACTGATTTTGGGATCACTTTCTTACAAGGATTACAAAAGCTTGCCCTGttaaatttggaaggatgcCTTATAACATCTGCTTGCTTGGATTCTCTAGCAGAGCTTCCTGCCCTGTCGAACTTGAATCTCAATAGATGCCATCTATCGGATGATGGTTGCGAACAGTTTTCACGTCTGGAAAATTTGAAAGTACTAAACTTGGGATTCAATGACATAACAGACTCATGTTTAGCGCACTTAAAAGGATTGACAAAGTTAGAGAACTTAAACTTAGATTCATGTAGGATTGGTGATAAAGGATTGGTCAACCTGGCAGGTCTTAGGCGATTAAAATGGTTGGAATTATCAGATACGGAAGTTGGAAGCAATGGCCTCCACCATTTATCAAGATTGTCTAGTCTGGAGAAAATAAACTTGTCATTCACCGTGGTAAGTGATAGTGGTTTAAGGAAATTGTGTGGACTCTCATCTTTGAAGTCGCTTAATTTGGATGCTCGCCAAATTACAGATAATGGACTAGCCGCACTTACAAGTTTGACTGGGCTTACTGACCTGGATTTGTTTGGTGCACGAATTACAGATTCAGGAACAAACTATTTGAAAAACTTCAAGAACCTGAGGTCGCTGGAAATATGTGGTGGAGAATTGACGGATGCTGGCGTCAAAAATATCAAAGAACTTTCATCTCTGACGTGCTTAAATTTATCACAGAACTGCAGTCTTACAGACAAGTCACTGGAGTTAATTTCCGGGCTGACCAAGTTGATGTCTTTGAATATTTCCAATTCTCGTGTCACCAAGGCCGGTCTGCAGCATCTTAAAACACTCAAGAATTTGCGATCTCTGACATTGGAATCCTGTAAGGTCACTGCAAATGACATTAAGAAACTTCAATCATCAGACCTCCCAAATCTTGTTAGCTTTCGGCCAGAGTAA 1752 0.3916 MGGACSRKQEQDNEDGSHRRLSRRYCRIGSLKWLTSSFSYPSIDFHLQKGECPSLLDLCIRKICEVLFKQNDIHKYSTFSMVPRDISQQIFNELVYSQRLTNASLKAFQDCALQDFYLGEYPGVDDSWMHIISSQGSSLLSLDLSGSDVTDYGLTYLKDCNNLQTLNLNHCDQISDHGLEYISGLSNLASLNFRRNNDISAQGMSTFSALVNLVKLDLERCPGIHGGLVHLRGLTKLESLNMKWCNCITDADMKPLSELTNLKSLEISCSKVTDFGITFLQGLQKLALLNLEGCLITSACLDSLAELPALSNLNLNRCHLSDDGCEQFSRLENLKVLNLGFNDITDSCLAHLKGLTKLENLNLDSCRIGDKGLVNLAGLRRLKWLELSDTEVGSNGLHHLSRLSSLEKINLSFTVVSDSGLRKLCGLSSLKSLNLDARQITDNGLAALTSLTGLTDLDLFGARITDSGTNYLKNFKNLRSLEICGGELTDAGVKNIKELSSLTCLNLSQNCSLTDKSLELISGLTKLMSLNISNSRVTKAGLQHLKTLKNLRSLTLESCKVTANDIKKLQSSDLPNLVSFRPE 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0133 583 PANTHER UNCHARACTERIZED 2 540 - -
Sto1g0133 583 Gene3D Ribonuclease Inhibitor 226 299 IPR032675 -
Sto1g0133 583 Gene3D Ribonuclease Inhibitor 487 578 IPR032675 -
Sto1g0133 583 Gene3D Ribonuclease Inhibitor 406 486 IPR032675 -
Sto1g0133 583 Gene3D Ribonuclease Inhibitor 132 225 IPR032675 -
Sto1g0133 583 Gene3D Ribonuclease Inhibitor 306 403 IPR032675 -
Sto1g0133 583 ProSiteProfiles Leucine-rich repeat profile. 333 353 IPR001611 GO:0005515
Sto1g0133 583 SUPERFAMILY RNI-like 124 367 - -
Sto1g0133 583 SUPERFAMILY RNI-like 280 571 - -
Sto1g0133 583 Pfam Leucine rich repeat 308 368 IPR001611 GO:0005515
Sto1g0133 583 Pfam Leucine rich repeat 477 535 IPR001611 GO:0005515
Sto1g0133 583 PANTHER LEUCINE-RICH REPEAT-CONTAINING G-PROTEIN COUPLED RECEPTOR 4-LIKE 2 540 - -
Sto1g0133 583 Pfam Leucine Rich repeat 160 183 IPR001611 GO:0005515
Sto1g0133 583 Pfam Leucine Rich repeat 235 257 IPR001611 GO:0005515
Sto1g0133 583 Pfam Leucine Rich repeat 404 425 IPR001611 GO:0005515
Sto1g0133 583 SMART LRR_CC_2 307 331 IPR006553 -
Sto1g0133 583 SMART LRR_CC_2 428 451 IPR006553 -
Sto1g0133 583 SMART LRR_CC_2 475 499 IPR006553 -
Sto1g0133 583 SMART LRR_CC_2 403 427 IPR006553 -
Sto1g0133 583 SMART LRR_CC_2 160 185 IPR006553 -
Sto1g0133 583 SMART LRR_CC_2 548 572 IPR006553 -
Sto1g0133 583 SMART LRR_CC_2 234 259 IPR006553 -
Sto1g0133 583 SMART LRR_CC_2 355 379 IPR006553 -
Sto1g0133 583 SMART LRR_CC_2 524 547 IPR006553 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0133 Sto-Chr1 931511 938077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto1g0133 112 563 Receptor kinase-like Gene Family AT5G51350 23.663 6.16e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0133 - - gmx:100800666 927.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0133 1 931511 938077 Sto1g0133 1 931511 938077 ECH