Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0120 ATGGCTCTTCTTCTCCGACGAAAGAACTCTTTCAGAAACCCTTCTCTAATCCACCTCTTCTCTACTTCTTCCTCCCATTCCAATTCAAACTCCAAATCCAACGAAGATGAACCAGAATCTTCCGCCTCCGATGATCGCGATTCTTCAAAACCTCAGTCTAGTTTTGGTTCCTCCTATTTCAGCGATATCAAGAAGAAGCTCAGTTCGCAGCAGTCCTCGTCCACGTTCCGTAGTCCCTCCACTCCATCTTTTACTGCTTCCGGTTCTGGGCCGCAGAGGTCCTCCTCCGTCTCTTATTCTCTTGAAGAAATCCGAAAGAACCTGTCCTCGTTTCGGAGTCGCTACTCTGagtcttcatcttcatctgcTCCTTCGTCGAATACTACCTCATTTCAGGAGATCTATGAAAGGAATGTGACAGGAAAACAGGGTGTTTCGCCGCCGATTGGTGACTCGGCGTCTGGAAGACTCGGAATCGATCTCATTCGCCAAACTTTGCAGAATAGTAAGCCTAACGTTGGGTCCCTTGACAGTGCCGGGAAAGGACAGTTAATGGACTTCACAAAGAGTTTAAGAATGAAGGCGAATTCTCAGACGTCATCACCCGTGATTGGTGGGACGGGTGAGTTGCCGGAGTATATTTTTGGCAGGGAGATGAGGGAGAAAGAGGCGGGAAAAATGTCAGAGGAGGGGAGATTGTTGTTTGTGAAGACTTATAAGCCTGAGGAATTGGGaaataaattgagaaaattgaGGCCGGAGACAAAAGGAAAGGACTGGTTTTCTCTGAGTGAGTTGAACGACAGGTTGATGAAATTGAGGGAGATGGAAGAGAAGGCTAATGACGTAAGTGTGAAGGGGATTACCGCCAAGGATTTGAGAGATGTCTTGACTAAGATAAAGGTTGATGATGctgtaaagaaaaataatttctCGGATAAATTTGATATCCTGGGTGAGCTTGGCAGGAAACCAAGCTTCATGCTGAAGCCTCCTCAAGAGCATCTTGTTGAAAAGGTACTGTTTGTTTATTACTACGAGATGTATTCTGGGAAATTGCAGTATTTCCATCCAGATAATATGTCTTCACAAGAAAAGTTGAAAATTGAACTTGCAAAAGTGAGGGATGAGTTTAAAATGTCAGAGTCAGATTGTGGGTCTTCTCGTGTTCAAGTTGCACAACTGACAACTAAGATTAAGCATCTATCATCAGTTCTACACAAGAAGGATAAGCATTCTCGTAAAGGGCTGATAGCAATGGTTCAGAAGAGGAAAAGGTTGCTGAAATACCTGAGAAGAACAGATTGGGATTCCTACTGTTTTGTGATTTCCAAGCTAGGTTTACGAGATAACCCAGATACTAAGTACTGA 1371 0.4274 MALLLRRKNSFRNPSLIHLFSTSSSHSNSNSKSNEDEPESSASDDRDSSKPQSSFGSSYFSDIKKKLSSQQSSSTFRSPSTPSFTASGSGPQRSSSVSYSLEEIRKNLSSFRSRYSESSSSSAPSSNTTSFQEIYERNVTGKQGVSPPIGDSASGRLGIDLIRQTLQNSKPNVGSLDSAGKGQLMDFTKSLRMKANSQTSSPVIGGTGELPEYIFGREMREKEAGKMSEEGRLLFVKTYKPEELGNKLRKLRPETKGKDWFSLSELNDRLMKLREMEEKANDVSVKGITAKDLRDVLTKIKVDDAVKKNNFSDKFDILGELGRKPSFMLKPPQEHLVEKVLFVYYYEMYSGKLQYFHPDNMSSQEKLKIELAKVRDEFKMSESDCGSSRVQVAQLTTKIKHLSSVLHKKDKHSRKGLIAMVQKRKRLLKYLRRTDWDSYCFVISKLGLRDNPDTKY 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0120 456 SMART Ribosomal_S15_2 371 449 IPR000589 GO:0003735|GO:0005840|GO:0006412
Sto1g0120 456 MobiDBLite consensus disorder prediction 21 99 - -
Sto1g0120 456 MobiDBLite consensus disorder prediction 47 99 - -
Sto1g0120 456 Pfam Ribosomal protein S15 373 449 IPR000589 GO:0003735|GO:0005840|GO:0006412
Sto1g0120 456 Hamap 30S ribosomal protein S15 [rpsO]. 361 450 IPR005290 GO:0003735|GO:0005840|GO:0006412
Sto1g0120 456 Coils Coil 263 283 - -
Sto1g0120 456 MobiDBLite consensus disorder prediction 21 36 - -
Sto1g0120 456 Gene3D - 366 414 - -
Sto1g0120 456 PANTHER S15/NS1, RNA-BINDING PROTEIN 2 456 - -
Sto1g0120 456 SUPERFAMILY S15/NS1 RNA-binding domain 371 450 IPR009068 -
Sto1g0120 456 CDD Ribosomal_S15p_S13e 373 447 IPR000589 GO:0003735|GO:0005840|GO:0006412
Sto1g0120 456 Gene3D - 416 451 - -
Sto1g0120 456 PANTHER S15/NS1, RNA-BINDING PROTEIN 2 456 - -
Sto1g0120 456 TIGRFAM S15_bact: ribosomal protein uS15 372 449 IPR005290 GO:0003735|GO:0005840|GO:0006412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0120 - - dzi:111279933 366.311