Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0109 ATGCTGTGTAGGAAGGGCCGTCCGACCGGCGGATCAGGATCGGTGCCGGTGTACCTGAACGTGTACGATCTAACGCCAATTAACGGCTACGCTTACTGGTTCGGCCTCGGAGTGTACCACTCCGGCGTTCAAGTTCACGGAGTGGAGTACGGATTCGGAGCTCACGAGTACAGTTCGACGGGGATATTCTCGGGAGAACCGAAACGGTGCGAAGGATTCGTGTATCGGAAGACGATAGCGATGGGGAAGACGGAGATGGGAGCGGAAGAGGTGAGGGTGGTGATGGAGGAGCTTGGAGGAGAGTACAGAGGGAATGCATATAACTTGATCACCAAGAATTGCAACCATTTCTGCAACGATGCTTGTGTTAGACTCACTGGAAATCCAATCCCAAGTTGGGTTAATCGTCTCGCTAGAATCGGATTCTTTTGCTATTGTGTTCTTCCAGTGACTATAAACTCAACCAGAGTAAGGCATCACAAAACTGAAGACAAGCAATGTGAAGCAGATCATAAGCAAGCATTGAGTACAAGTGATCCAAACAAGGTTACAACTTCAAATtcaacatcatcttcttcttcttcttcttcatcatcatcatcccctGGAATTCACATGGGAAGAAGTAGAAGCAGACGTGCCCTTCCTCCATCTTCCCCTTTGATTAATATTCAGCCTTCTCCTTCATCTTCTTGTCCAAACTCTCAACAATAA 714 0.451 MLCRKGRPTGGSGSVPVYLNVYDLTPINGYAYWFGLGVYHSGVQVHGVEYGFGAHEYSSTGIFSGEPKRCEGFVYRKTIAMGKTEMGAEEVRVVMEELGGEYRGNAYNLITKNCNHFCNDACVRLTGNPIPSWVNRLARIGFFCYCVLPVTINSTRVRHHKTEDKQCEADHKQALSTSDPNKVTTSNSTSSSSSSSSSSSSPGIHMGRSRSRRALPPSSPLINIQPSPSSSCPNSQQ 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0109 237 Pfam PPPDE putative peptidase domain 16 149 IPR008580 GO:0008233
Sto1g0109 237 Gene3D PPPDE domains 12 170 IPR042266 -
Sto1g0109 237 MobiDBLite consensus disorder prediction 164 237 - -
Sto1g0109 237 MobiDBLite consensus disorder prediction 173 206 - -
Sto1g0109 237 PANTHER F23A5.4 PROTEIN 9 225 - -
Sto1g0109 237 MobiDBLite consensus disorder prediction 216 237 - -
Sto1g0109 237 PANTHER DESUMOYLATING ISOPEPTIDASE 9 225 IPR008580 GO:0008233
Sto1g0109 237 SMART DUF862_2a 15 153 IPR008580 GO:0008233
Sto1g0109 237 ProSiteProfiles PPPDE domain profile. 15 152 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0109 Sto-Chr1 741967 744513 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0109 K22763 - gmx:100796813 330.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0109 1 741967 744513 Sto1g0109 1 741967 744513 ECH