Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0099 atgagagtttcagtCAAGAAGCTTTTCAAGATGTGTGGAGTCAGAAACCGCTCAATTTTGGAAGTGTGTGCTTGCATGTTCAACACATTGGCAGAAACCCCTGAATTCTTTTCTAGGCTCTTGCGGTGGAAGATGGCTCCTCCTGATGAGCAAGTGCTAGAGAGGCTTATGGAAGCTGGCTATAGCATTCTCAATAACCTCTCTTCGGTTAATCAGCTTCTCAGTCTTCTGGATGCTCTCTCAGGGCTGAAATTTGGCATTTCTAACCTGGAATGGATTGTCAGAGGCAAATTCTTTTTTGAACTGCCATGTATTAGAATCCCTAACCCTTGTTGTATACTGGGAATGTGCCTTTTGAGCCAAGGCTCTCGGGGGCtgaaatttgacatttctaacCTGGAATGGGTTGGCAGAGGCAAATTCTGCATTCCAATCGGGATAAAACTCGAGAGTTTATTAACATCACTGGATCAAGCACCAGACACAAGACTGAAAGATGCCCTTATGCTACCAATGGCGGCATTAACTTCTGATGAACTTTTCAGGCACTCAAGTATGGATGTTAAGACTTCAGTTATATCTTGCATCTCTGAGATTACTAGAATAACAGCACCCGATGCCCCTTTTAATGATCAACGAATGAAGGAAATTTTCAAGCTCACAGTAGCagcttttgaaaaattatctgATGTATCCGGCCGCTGTTATGAAAAAGCAATTTCGATAGTTGACAATGTTGCAAGGGTCAGATCATGCTTACTCATGTTGGACCTTGAGTGTGATGATTTGATGATTGAGATGTTTCAGCATTTCCTCAGAGTCATAAGGTCAAATCACCCATATTTTGTGAAGTATGCCATGGAAACAATAATGACCATGGTCTTGGATGAGAGTGAAGAAGTTTCAGTGGATCTTCTTAGACCATTATTAGATAGTGTGAGAAAGGAAAATCAGAAAATTTCACCTATTTCTTGGTCATTGGGGGAGAAAGTTATTACCAACTGTGCTGATAAACTTCAGCCCTATCTTTTGAAAGCTGTGCAGTCCACAGGAAAACCTCTGGATGCTTTTGCCCAAATAGTAGTTTCTATTTGCCAGAGAGAAGCTGAAACTCTCCAATGCAATGATTTAAATGGTCCTAGAAATTCTCTGGTTCAGGCAGATGAAAACAAGCTTGCTGTAAGTAAAGATGTAGATGAGCAACCCATTGATGTGACAATGGGACTTGAACCAGATATGACTTGTGCAAGAGATGTTGCTGAAGCTATGGAAGATGTGAAGCCAAACAAAAGAAATGTTAGTGCTTCTACTATGAATGACAAAAGGAGCAATGCAAAACCCAGTTTGACAGATGGAGATTTTGAGGCTGTTACGGAACCAAAATCAGGAGCTGAGCTGGATACCATGCCAATGAAAAGAGGTCGCAAACCTAATTCTTTAATGAATCCAGAGGAAGGCTATGATAACTCTTGGATTTATGAGGGGAAAAAATCTGCAAAATCAGTTAAGTCCAAGAAGGCTCGAACTAGTGGCCATGATTTTCCATCTTCTGAATGCCTTACTTCCAGAGAGGATAAATTGCTGTCAAAGCCTGAAAATGTGGGTGAAGTTTCTCAACCTAAAACCAAGAAAACCATAAAGGCAGCTCAACTCAAAAAGGCCCGTGCTGAACTTACTGGTCCACCTTCTGAAAACCCTGCTTTGCGGAAGGATGAATTGCCGTTAGATCCTAAAGATGCAGGTGAGCTTTCTCAACCTAAAATCAAGAAAACCGCCAAAGCAGCTGAATCCATAAAGGCTTGTGATGATGAACTAGAACTTTCACATTCTGAAAACCCTGCCTTGCAGAAGGATAAGTTGGCTTTAGATCCCAAAAGTGTAGGTGAGCTTTCTCAACCTAAAATCAAGAAAACCACCAAAGCAGTTCAATCCATAAAGGCTTGTGATGATGTTTCACCTTCTGAAAACCCCGCTTCGCAGAAGGATAAGTTGCCTTTAGAGTTTACGAATTCAGGTGAGATTTCTCAACCTAAAATCAAGAAAACCACCAACGCAGTTCGATCCATAAAGGCTTCTGATGATGTCCTTGAACTTTCTCTTTCTGCCAACCCTGATTTGCAAAAGGAGAAGTTTTCGTCAAATCCTGAAAATATGACTGAAGGCTGTGAAGGCAGTGAAGCATTAGAGCCTCAACCTAAAACTGATAAGAATGCGGATGCTGCTAGACCTTTGACAAATGATGGCATTCCTGAAATAAGTCCTCGCAAAAGAGGTCGTCCAAAGAAAAACAGTATCACCTATAATCAAGGCGTCGACCCTAAATCTGCTTCAATGGTAGAGGAAGATCATTCAATTGCTCAGCTCAAGGATAATTCTTTGGAACCTCCTAGTCTGAAGTCCAAAAAGGACTTTGAAGTAATGAAAGATTCTGAAGCAAAAACTCAGGAACCtcgtaaaaaaattaaatttgctgCTAAGACTGATAAGAAAACTGCCATGGCTACTGAGTCAGTAGTTAGTGAGAAGGAATGTAAGTCATCTTGTGAAAAGGAGGAGAAGCCCAAGTCAGTTATGAATATTGAGACAGCaaataagaaaaggaagaggCCTGATGCTACTCCTAATAAAGATCCCAATGACCACTCTATTATAAAGCTGATAAGCAAGTCTGCAACCAAAACTCTGAAGGGAGTTGAAGAAACCCCTCAAACAAGACCAAGGAAAAAGAGCACCGCTGTGTGTGTAGAGGCATCTGAAATCCGTGACTGTAATGAACCTTTAGTTGGTAGCAAGATCAATGTCTGGTGGCCATTGGATAAGAGGTTTTATGAAGGCACAGTTGATTCTTATGACTCAGTTAAAGGAAAGCACAAGATTTtgtatgatgatggtgatgtggaagttttaaacctcaaaaaggAACGCTGGGAGCAAATTGTTGATCACAATTCACTAGATGCTGAAAAAGGAATTGATCTTCAACAGCTTGAGGCAGAGGCATCAGATATACCAGAAAAAGGTAATTCAGGGTCGGAGTCATCCAAGGCCAAAAATGTTGGTTCTCGCCAGAGGAGGGGTAGAACTTCTGCCAGAACTCCAAAATCTGCTGCCAAATCTGAGGATGAACCTGTTGCGGCTGATGAATCCATGGCTGATCCACCTAGAACTTCTGCCAAAACCCGTAAATCTGCATCTGCAAAATCTGCTGCCAAATCTGAAGATGAACCTGTTATGGCTGATGAATCCATGGCTGATCGAGGTAGAACTTCTGCCAGAACCCCAAAATCTGCATCTGCAAAATCTGCTGCCATATCTGAGGTTGAACCTATTGTGGCTGATGAATCCCTGGGTGATCCAGGTAGAACTTCTGCCAAAGCCCGTAAATCTGCATCTGCAAAATCTGCTGCCATATCTAAGGATGAACCTGTTGTGGCTGATGAACCCATGGCTGATCCACCTAGAAATAAGAATAAGCAAGAGTCATCTGGGAAGTCTGGAACCAAAACATTGAAGATTGTTTCCAATACGAAAAAGCTCAAATCTGGAGCCGAGAGCGGAAAGCAACAGTCATCTGTGGCTGATGAATCCATGGCTGATCGAGGCAGAACTTCTgccaaaaccccaaaatctGCATCTGCAAAATCTGCTGCCAAATGTGACGATGAACCTGTTGTGGCTGATGAACCCATGGCTGATCCACCTAGAACTAAGAATAAGCAACAGTCATCTGGGAAGTCTGTAACCAAAACAGCAAAGACTGTTTCGAATACGAAAAAGCTCGAATCTGGAGCCGGAAGCAGTAAGCAACAGTCATCTGTGGCTGATGAATCCATGGCTGATCCAGGTAAAACTTCTGCCAGAACCCTTAAATCTGCATCTGCAAAATCTGCGGCCAAATCTCAGGAAGAACCTGTTGTGGCTGATGAACCCATGGCTGATCCACCTAGAACTAAGATTAAGCAACAGTCATCCGGGAAGTCTGGAACCGAAACACCAAAGATTGTTTCCAGTACGAAAAAGCTCAAATCCGGAGCCGAGAGCGGAAAGAAGTCAAAATTGCAGAAAGCACAGAAGCGCAAAGAAAGCCCATAA 4092 0.411 MRVSVKKLFKMCGVRNRSILEVCACMFNTLAETPEFFSRLLRWKMAPPDEQVLERLMEAGYSILNNLSSVNQLLSLLDALSGLKFGISNLEWIVRGKFFFELPCIRIPNPCCILGMCLLSQGSRGLKFDISNLEWVGRGKFCIPIGIKLESLLTSLDQAPDTRLKDALMLPMAALTSDELFRHSSMDVKTSVISCISEITRITAPDAPFNDQRMKEIFKLTVAAFEKLSDVSGRCYEKAISIVDNVARVRSCLLMLDLECDDLMIEMFQHFLRVIRSNHPYFVKYAMETIMTMVLDESEEVSVDLLRPLLDSVRKENQKISPISWSLGEKVITNCADKLQPYLLKAVQSTGKPLDAFAQIVVSICQREAETLQCNDLNGPRNSLVQADENKLAVSKDVDEQPIDVTMGLEPDMTCARDVAEAMEDVKPNKRNVSASTMNDKRSNAKPSLTDGDFEAVTEPKSGAELDTMPMKRGRKPNSLMNPEEGYDNSWIYEGKKSAKSVKSKKARTSGHDFPSSECLTSREDKLLSKPENVGEVSQPKTKKTIKAAQLKKARAELTGPPSENPALRKDELPLDPKDAGELSQPKIKKTAKAAESIKACDDELELSHSENPALQKDKLALDPKSVGELSQPKIKKTTKAVQSIKACDDVSPSENPASQKDKLPLEFTNSGEISQPKIKKTTNAVRSIKASDDVLELSLSANPDLQKEKFSSNPENMTEGCEGSEALEPQPKTDKNADAARPLTNDGIPEISPRKRGRPKKNSITYNQGVDPKSASMVEEDHSIAQLKDNSLEPPSLKSKKDFEVMKDSEAKTQEPRKKIKFAAKTDKKTAMATESVVSEKECKSSCEKEEKPKSVMNIETANKKRKRPDATPNKDPNDHSIIKLISKSATKTLKGVEETPQTRPRKKSTAVCVEASEIRDCNEPLVGSKINVWWPLDKRFYEGTVDSYDSVKGKHKILYDDGDVEVLNLKKERWEQIVDHNSLDAEKGIDLQQLEAEASDIPEKGNSGSESSKAKNVGSRQRRGRTSARTPKSAAKSEDEPVAADESMADPPRTSAKTRKSASAKSAAKSEDEPVMADESMADRGRTSARTPKSASAKSAAISEVEPIVADESLGDPGRTSAKARKSASAKSAAISKDEPVVADEPMADPPRNKNKQESSGKSGTKTLKIVSNTKKLKSGAESGKQQSSVADESMADRGRTSAKTPKSASAKSAAKCDDEPVVADEPMADPPRTKNKQQSSGKSVTKTAKTVSNTKKLESGAGSSKQQSSVADESMADPGKTSARTLKSASAKSAAKSQEEPVVADEPMADPPRTKIKQQSSGKSGTETPKIVSSTKKLKSGAESGKKSKLQKAQKRKESP 1363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0099 1363 SUPERFAMILY ARM repeat 180 351 IPR016024 -
Sto1g0099 1363 MobiDBLite consensus disorder prediction 609 624 - -
Sto1g0099 1363 MobiDBLite consensus disorder prediction 705 720 - -
Sto1g0099 1363 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 618 1160 IPR039776 GO:0007064
Sto1g0099 1363 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 49 655 IPR039776 GO:0007064
Sto1g0099 1363 MobiDBLite consensus disorder prediction 1343 1363 - -
Sto1g0099 1363 MobiDBLite consensus disorder prediction 795 819 - -
Sto1g0099 1363 MobiDBLite consensus disorder prediction 847 883 - -
Sto1g0099 1363 MobiDBLite consensus disorder prediction 1159 1211 - -
Sto1g0099 1363 MobiDBLite consensus disorder prediction 506 531 - -
Sto1g0099 1363 MobiDBLite consensus disorder prediction 1066 1088 - -
Sto1g0099 1363 Gene3D - 925 977 - -
Sto1g0099 1363 Pfam Sister chromatid cohesion protein PDS5 protein 149 343 - -
Sto1g0099 1363 MobiDBLite consensus disorder prediction 423 489 - -
Sto1g0099 1363 MobiDBLite consensus disorder prediction 569 586 - -
Sto1g0099 1363 MobiDBLite consensus disorder prediction 609 670 - -
Sto1g0099 1363 MobiDBLite consensus disorder prediction 847 878 - -
Sto1g0099 1363 MobiDBLite consensus disorder prediction 981 1363 - -
Sto1g0099 1363 PANTHER TRANSCRIPTIONAL REGULATOR 49 655 - -
Sto1g0099 1363 PANTHER TRANSCRIPTIONAL REGULATOR 618 1160 - -
Sto1g0099 1363 MobiDBLite consensus disorder prediction 430 445 - -
Sto1g0099 1363 MobiDBLite consensus disorder prediction 649 670 - -
Sto1g0099 1363 MobiDBLite consensus disorder prediction 700 819 - -
Sto1g0099 1363 SUPERFAMILY Tudor/PWWP/MBT 926 966 - -
Sto1g0099 1363 MobiDBLite consensus disorder prediction 502 596 - -
Sto1g0099 1363 MobiDBLite consensus disorder prediction 1144 1158 - -
Sto1g0099 1363 MobiDBLite consensus disorder prediction 1235 1298 - -
Sto1g0099 1363 MobiDBLite consensus disorder prediction 1317 1342 - -
Sto1g0099 1363 MobiDBLite consensus disorder prediction 981 995 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0099 Sto-Chr1 633764 643837 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0099 - - adu:107463779 526.554