Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0008 ATGGCGGCAAACCAACCCCAGGGTCCGGATCGTACGACCGAAGAGGTAGCAGCTGAACCAGATAAAATGAAGGATCAGCTTCATTCTTCAATACCAGATAGGTCAATTTCTTCTAATTCCTCTCAGGATATGGCAACCATGGGTCATTCAAGAGAAACAACAAGTCAATCAGGATCATTTATTTCAGGTGGAGGTTGTCCTCTCTACCCTCCTAATGTCTATGCTCCACAGGCCCAGGCTTTCTTCTACcgagGTTTTGAAAATGCTAACGGAGAATGGGATGAATATCCTTCGTATATCACTTCTGAAGGATTGGAAATTGGATCTCCTGGTCTCTACAATGATAATccatctcttcttttccattctgGATATGGCTTCAACCCTCAAATGCCTTATGGTCCATATTCCCCAGTTACAACACCTTTGCCTTCTGTAGGTGGAGATGCACAATTATACTCTCCCCAGCAATTTCCATACACTGGACCACCTTATTACCACCAACTGGTTCCTCCTAGCTTACCATATCTTACTTCACCAGCTCCAGCTTCACAGCCAGAGGTCACCAACTTGGTAGGTGTTGATCGACAAGGTGACAACATGATTTTGGGACCAAGACCTGGCTATCCCTCAGTGGGATCTTTTGGCAGAGGCAGTTTTCCTGGAGCACTTGGTTCCTTTGGCTTTCAGGACTCCCAACAAGGATTTGATGGTCCAAGATCCAGTGGAAATGGAATCTGGTCAGATTACACAAAACCCTCAGAAAGGCAGATGTCTTTGATGCCCCTATCACCAGCCGTATCTCCACAGCCAATTGGGCCACTTGGGTCATTTGGGCAGAGTGTTGGAATGGCTTCTCATCAACAACCACCATTGTACGGGTTTGGATCTGGATTGAACTCTTATGGTAGAGACTACCTACCCAACCACGGTTCTAGATTTGGTGCCAATGCCATTTCCAGTCTAGGTGCAAATGATAGGAACTGGCTTTCTCTTGACCATAGCAGACGGCGTGACAGGGGAACATCTTCTTTTTGCAGTAGTGATGGTACTCCTGATATACTTACTGAGCAGAACCGAGGTCCAAGGGCCTCCAAGCTTAAGAATCAGACGTCAGCTGAAAATGTTTCTGTTGATAGTAGTAAAAATATTACTTCTACCCTCAAGTTTCACAATGAATCATTTAACCGACCAGATTTTGTCACAGATTACAAGGATGCCaaattttttgtcattaaatcTTATAGTGAAGATAATGTTCACAAAAGTATCAAATACGGTGTCTGGGCCAGTACAccaaatggaaatagaaagctAGATGCTGCATATCGCCAAGCAAAGGAGAAGCAAGATCCTTGTCCtatatttctcttcttctcgGTAAATGCTAGTGCTCAGTTTTGTGGAGTGGCTGAAATGGTTGGACCTGTTGATTTTGACAAGAGTGTGGATTACTGGCAGCAAGATAAGTGGAGTGGACAATTCCCTGTCAAGTGGCACATAATTAAAGATGTCCCTAACAGTCAGTTTCGACACATTGTTCTTGAAAATAATGATAACAAGCCTGTGACCAACAGTCGAGATACTCAGGAGGTGAAATTCCAACAGGGGATTGAAATTTTAACCATTTTTAAGAATTATGAAACTGAAATGTCGATCCTCgatgattttgatttttatgaAGACCGGCAAAAGGCTATGCAAGATCGGAAAGCAAGACAGCAAGCCAGCCTGATGGCTATAGCGGTTGGAGAAAGTGAACATAAGACTTCTGCTAACATAAATGGTGATTTCATGAAGCAGATGCCAAAGAGCTTTGCTCAAGTTGTCCGCTTAGAAGAGGGTAGTAATGAAGGTAGTTTAACCACTGATGGCTCCAATGGTACTGTAGTTAAGCCTGAAGATGGTATTCCTGTGGCTGCCTCTTCAGTCCAAACCAGTTAG 1944 0.4192 MAANQPQGPDRTTEEVAAEPDKMKDQLHSSIPDRSISSNSSQDMATMGHSRETTSQSGSFISGGGCPLYPPNVYAPQAQAFFYRGFENANGEWDEYPSYITSEGLEIGSPGLYNDNPSLLFHSGYGFNPQMPYGPYSPVTTPLPSVGGDAQLYSPQQFPYTGPPYYHQLVPPSLPYLTSPAPASQPEVTNLVGVDRQGDNMILGPRPGYPSVGSFGRGSFPGALGSFGFQDSQQGFDGPRSSGNGIWSDYTKPSERQMSLMPLSPAVSPQPIGPLGSFGQSVGMASHQQPPLYGFGSGLNSYGRDYLPNHGSRFGANAISSLGANDRNWLSLDHSRRRDRGTSSFCSSDGTPDILTEQNRGPRASKLKNQTSAENVSVDSSKNITSTLKFHNESFNRPDFVTDYKDAKFFVIKSYSEDNVHKSIKYGVWASTPNGNRKLDAAYRQAKEKQDPCPIFLFFSVNASAQFCGVAEMVGPVDFDKSVDYWQQDKWSGQFPVKWHIIKDVPNSQFRHIVLENNDNKPVTNSRDTQEVKFQQGIEILTIFKNYETEMSILDDFDFYEDRQKAMQDRKARQQASLMAIAVGESEHKTSANINGDFMKQMPKSFAQVVRLEEGSNEGSLTTDGSNGTVVKPEDGIPVAASSVQTS 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0008 647 MobiDBLite consensus disorder prediction 14 29 - -
Sto1g0008 647 Pfam YT521-B-like domain 407 545 IPR007275 GO:0003723
Sto1g0008 647 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 9 628 IPR045168 -
Sto1g0008 647 MobiDBLite consensus disorder prediction 338 374 - -
Sto1g0008 647 MobiDBLite consensus disorder prediction 615 647 - -
Sto1g0008 647 PANTHER EVOLUTIONARILY CONSERVED C-TERMINAL REGION 5 9 628 - -
Sto1g0008 647 MobiDBLite consensus disorder prediction 1 59 - -
Sto1g0008 647 ProSiteProfiles YTH domain profile. 407 544 IPR007275 GO:0003723
Sto1g0008 647 MobiDBLite consensus disorder prediction 30 59 - -
Sto1g0008 647 Gene3D ph1033 like domains 384 559 - -
Sto1g0008 647 MobiDBLite consensus disorder prediction 615 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0008 Sto-Chr1 57670 65019 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0008 K20102 - gmx:100816860 997.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0008 1 57670 65019 Sto1g0008 1 57670 65019 ECH