Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto1g0003 ATGAGCGCCGCAGCATCAGCAACTACTAGTTCCAGTTTCAGCAGTGGCAGTGTGTACCACTACTCGAAGTGTAGAGTCTCTTCGTATCTTCATGGTTCCATTTCCTTTCCTAATCGTTTTCCGTCTCGCACTAACACCCGCGGGTGCCGGAATTCTTGTGGGCGGAAGTCTCAATTGCTGCTAGTTACCAGAGCTGCTGCTCCAGAGGACAGAGAGAGTAATAATGCCCAAAATGATGATGACGGTAACGATGAGAATCAACGAGTACAAAAGCAACAATCGATCCAGCCGTCTGTCTCGCTTAGCCTGGATGACGTAAATCCAGTAGGTCTTGGTCGAAGATCGCGTCAGTTATTCGACGAGGTTTGGAGGAAGTTCTCGGGATTGGGTCAGATCTCTAGGACCATCCGCACTGACGATAAGGACGCTCTTGATGCTCTTCTCATTCGAGAGGGACCTATGTGTGAGTTCGCTATCCCTGGCGCTCAGAATATTGTTGTGCTCGTTGTTGGTGCCACCAGTCGCATTGGTCGAATTGTCGTCCGCAAGCTCATGCTCAGGGGCTACGTAGTGAAGGCTTTGGTAAGGAAGGCAGATGAGGAGGTGGTGGAGATGCTTCCCAGGTCAGTAGAGATAGTAATTGGTGATGTCGGTGACCCTGCCACCCTCAAGGCTGCTGTAGAAGGTTGTAACAAAATAATCTATTGTGCCACTGCTCGATCTGCAATCACTGGTGATCTTGTTAGGGTTGATCACCAAGGAGTTTATAACCTTTCTAAAGCATTTCAGGATTACAATAATAAATTGGCGCAATTGCGAGCTGGTAAAAGCAGTAAGAGCAAGCTCTTGATTGCAAAATTTAGATCTGCAGATTCATTGAATGGATGGGAACTTCGTCAAGGAACTTACTTCCAAGATGTTGTTGCCACAAAATATGATGGAGGGATGGATGCCAAATTTGAGTTCACTGAAACTGGAGAAGCCGTTTTCTCAGggtatgttttcACTAGAGGAGGCTATGTGGAACTTTCAAAAAAGCTGTCTCTTCCTTTAGGCTGCACACTTGACAGGTATGAGGGTCTAGTTCTCTCTGTTGGTGGCAATGGAAGATCTTATGTTTTAATTCTAGAAGCTGGTCCTTCGGTAGATCCAAGTCAGAGCAAATTATATTTTGCAAGAATTAGTACAAAAGTGGGATTTTGTAGGGTGAGAGTACCATTTTCCTCATTCCGCCCAGTGAAACCAGATGATCCATCTTTAGACCCTTTTCTTGTACATACATTGACAATACGTTTCGAACCTAGAAGACAGAGGCCAACTGAAGTATATGCAGCCATGAAGCAAGATTTGAGAAGCTTTAAGCTTATATTGGAATATATAAAAGCTTTGCCTACTGGGCAAGAAACAGATTTTATCCTAGTTTCATGTTCAGGACTAGGAATTGAACCTTCCAGAAGGGAGCAGGTTCTTAAAGCCAAGAAGGCTGGGGAAGATTCATTAAGAAGATCTGGCCTTGGATACACAATAATTCGTCCCGGTCCCCTAAAGGAAGAACCCGGTGGGCAGCGTGCTCTAATTTTTGACCAAGGAAACAGAATATCTCAGGGCATCAGCTGTGCTGATGTGGCTGATATATGTGTGAAAGCACTACATGATTCGACTGCAAGAAACAAAAGCTTTGATGTATGTTACGAATATGTTGCCGAGGAAGGCAGAGAGCTTTACGAGCTGGTTGCGCACTTACCTGATAAAGCAAATAACTACTTGACCCCAGCGCTATCTGTTTTGGAGAAGAATACCTGA 1803 0.4476 MSAAASATTSSSFSSGSVYHYSKCRVSSYLHGSISFPNRFPSRTNTRGCRNSCGRKSQLLLVTRAAAPEDRESNNAQNDDDGNDENQRVQKQQSIQPSVSLSLDDVNPVGLGRRSRQLFDEVWRKFSGLGQISRTIRTDDKDALDALLIREGPMCEFAIPGAQNIVVLVVGATSRIGRIVVRKLMLRGYVVKALVRKADEEVVEMLPRSVEIVIGDVGDPATLKAAVEGCNKIIYCATARSAITGDLVRVDHQGVYNLSKAFQDYNNKLAQLRAGKSSKSKLLIAKFRSADSLNGWELRQGTYFQDVVATKYDGGMDAKFEFTETGEAVFSGYVFTRGGYVELSKKLSLPLGCTLDRYEGLVLSVGGNGRSYVLILEAGPSVDPSQSKLYFARISTKVGFCRVRVPFSSFRPVKPDDPSLDPFLVHTLTIRFEPRRQRPTEVYAAMKQDLRSFKLILEYIKALPTGQETDFILVSCSGLGIEPSRREQVLKAKKAGEDSLRRSGLGYTIIRPGPLKEEPGGQRALIFDQGNRISQGISCADVADICVKALHDSTARNKSFDVCYEYVAEEGRELYELVAHLPDKANNYLTPALSVLEKNT 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto1g0003 600 MobiDBLite consensus disorder prediction 64 97 - -
Sto1g0003 600 Pfam NAD(P)H-binding 471 552 IPR016040 -
Sto1g0003 600 Pfam NAD(P)H-binding 171 263 IPR016040 -
Sto1g0003 600 SUPERFAMILY Galactose-binding domain-like 283 428 IPR008979 -
Sto1g0003 600 MobiDBLite consensus disorder prediction 73 87 - -
Sto1g0003 600 PANTHER EPIMERASE-RELATED 74 599 - -
Sto1g0003 600 Gene3D - 422 578 - -
Sto1g0003 600 Gene3D - 165 271 - -
Sto1g0003 600 PANTHER HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173 74 599 - -
Sto1g0003 600 Pfam Complex I intermediate-associated protein 30 (CIA30) 314 413 IPR013857 -
Sto1g0003 600 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 165 576 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto1g0003 Sto-Chr1 18366 28661 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto1g0003 - - aprc:113857040 961.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto1g0003 1 18366 28661 Sto1g0003 1 18366 28661 ECH